RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 RAI14Q9P0K7 980 aa4.79□□□□□ -1.64
HCFC2-204ENST00000550335 RNF14Q9UBS8 474 aa4.79□□□□□ -1.64
HCFC2-204ENST00000550335 LCMT1Q9UIC8 334 aa4.79□□□□□ -1.64
HCFC2-204ENST00000550335 DDX49Q9Y6V7 483 aaKnown RBP4.79□□□□□ -1.64
HCFC2-204ENST00000550335 POLR1AO95602 1720 aaPredicted RBP4.79□□□□□ -1.64
HCFC2-204ENST00000550335 UBR1Q8IWV7 1749 aa4.79□□□□□ -1.64
HCFC2-204ENST00000550335 PIK3C2BO00750 1634 aa4.79□□□□□ -1.64
HCFC2-204ENST00000550335 CCDC7Q96M83 1385 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 SYNMO15061 1565 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 SALL1Q9NSC2 1324 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 ADGRB3O60242 1522 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 IGLV7-46A0A075B6I9 117 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 NPIPA5A0A0B4J1W7 369 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 EME2A4GXA9 379 aaPredicted RBP4.78□□□□□ -1.64
HCFC2-204ENST00000550335 ARHGEF33A8MVX0 844 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 NPIPA5E9PKD4 350 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 DUX1O43812 170 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 SPAG6O75602 509 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 NEBLO76041 1014 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 MT-ND1P03886 318 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 SP1P08047 785 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 FCGR3AP08637 254 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 UQCRC2P22695 453 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 RIDAP52758 137 aaKnown RBP4.78□□□□□ -1.64
HCFC2-204ENST00000550335 UBE2HP62256 183 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 IL9RQ01113 521 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 ZNF146Q15072 292 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 CHI3L2Q15782 390 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 TATDN3Q17R31 274 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 WDR25Q64LD2 544 aaPredicted RBP4.78□□□□□ -1.64
HCFC2-204ENST00000550335 BTNL3Q6UXE8 466 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 ADAMTSL5Q6ZMM2 481 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 PRSS48Q7RTY5 328 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 NOTCH2NLQ7Z3S9 236 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 NUFIP2Q7Z417 695 aaKnown RBP4.78□□□□□ -1.64
HCFC2-204ENST00000550335 EIF1ADQ8N9N8 165 aaKnown RBP4.78□□□□□ -1.64
HCFC2-204ENST00000550335 LGMNQ99538 433 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 ANP32EQ9BTT0 268 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 EDEM2Q9BV94 578 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 TBC1D10AQ9BXI6 508 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 CAPS2Q9BXY5 557 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 LRRC40Q9H9A6 602 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 MEAF6Q9HAF1 191 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 NDE1Q9NXR1 346 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 TMEM181Q9P2C4 612 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 PTBP2Q9UKA9 531 aaKnown RBP4.78□□□□□ -1.64
HCFC2-204ENST00000550335 LRP12Q9Y561 859 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 CPQQ9Y646 472 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 PIK3R4Q99570 1358 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 PLEKHG1Q9ULL1 1385 aa4.78□□□□□ -1.64
HCFC2-204ENST00000550335 IQGAP1P46940 1657 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 PRR23AA6NEV1 266 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 MFSD2BA6NFX1 497 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 MPTX1A8MV57 137 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 C11orf98E9PRG8 122 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 PPIAL4DF5H284 164 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 TRAFD1O14545 582 aaPredicted RBP4.77□□□□□ -1.65
HCFC2-204ENST00000550335 TOM1O60784 492 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 SORBS2O94875 1100 aaKnown RBP4.77□□□□□ -1.65
HCFC2-204ENST00000550335 POP4O95707 220 aaKnown RBP4.77□□□□□ -1.65
HCFC2-204ENST00000550335 NUDT14O95848 222 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 FOSL2P15408 326 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 HNF1AP20823 631 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 DHPSP49366 369 aaPredicted RBP4.77□□□□□ -1.65
HCFC2-204ENST00000550335 FASTKD3Q14CZ7 662 aaKnown RBP4.77□□□□□ -1.65
HCFC2-204ENST00000550335 RAB35Q15286 201 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 RABL6Q3YEC7 729 aaPredicted RBP4.77□□□□□ -1.65
HCFC2-204ENST00000550335 LANCL3Q6ZV70 420 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 USP43Q70EL4 1123 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 LRRTM1Q86UE6 522 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 ZCCHC7Q8N3Z6 543 aaKnown RBP4.77□□□□□ -1.65
HCFC2-204ENST00000550335 ZNF614Q8N883 585 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 CNIH3Q8TBE1 160 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 RPL3LQ92901 407 aaKnown RBP4.77□□□□□ -1.65
HCFC2-204ENST00000550335 DUX3Q96PT4 197 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 HSD17B14Q9BPX1 270 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 GON7Q9BXV9 100 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 GPN2Q9H9Y4 310 aaPredicted RBP4.77□□□□□ -1.65
HCFC2-204ENST00000550335 ELOVL3Q9HB03 270 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 WWOXQ9NZC7 414 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 THAP10Q9P2Z0 257 aaPredicted RBP4.77□□□□□ -1.65
HCFC2-204ENST00000550335 GAB2Q9UQC2 676 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 DHRS7Q9Y394 339 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 ZFYVE9O95405 1425 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 NCOA3Q9Y6Q9 1424 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 E9PCH4 1651 aa4.77□□□□□ -1.65
HCFC2-204ENST00000550335 TMEM131LA2VDJ0 1609 aa4.76□□□□□ -1.65
HCFC2-204ENST00000550335 TRABD2BA6NFA1 517 aa4.76□□□□□ -1.65
HCFC2-204ENST00000550335 UBXN8O00124 270 aa4.76□□□□□ -1.65
HCFC2-204ENST00000550335 CLDN5O00501 218 aa4.76□□□□□ -1.65
HCFC2-204ENST00000550335 ADCY5O95622 1261 aa4.76□□□□□ -1.65
HCFC2-204ENST00000550335 CHRNA1P02708 482 aa4.76□□□□□ -1.65
HCFC2-204ENST00000550335 OPN1MWP04001 364 aa4.76□□□□□ -1.65
HCFC2-204ENST00000550335 CFC1BP0CG36 223 aa4.76□□□□□ -1.65
HCFC2-204ENST00000550335 CFC1P0CG37 223 aa4.76□□□□□ -1.65
HCFC2-204ENST00000550335 OPN1MW2P0DN77 364 aa4.76□□□□□ -1.65
HCFC2-204ENST00000550335 OPN1MW3P0DN78 364 aa4.76□□□□□ -1.65
HCFC2-204ENST00000550335 SLC1A4P43007 532 aa4.76□□□□□ -1.65
HCFC2-204ENST00000550335 ACADVLP49748 655 aa4.76□□□□□ -1.65
HCFC2-204ENST00000550335 SULT1E1P49888 294 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms