RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 MAP2K4P45985 399 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 ZP2Q05996 745 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 C3orf38Q5JPI3 329 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 RPL13AP3Q6NVV1 102 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 ATCAYQ86WG3 371 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 D2HGDHQ8N465 521 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 ZNF615Q8N8J6 731 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 GALNT6Q8NCL4 622 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 ZCCHC10Q8TBK6 192 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 TMEM163Q8TC26 289 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 LRFN5Q96NI6 719 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 RHNO1Q9BSD3 238 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 LIN28AQ9H9Z2 209 aaKnown RBP9.28□□□□□ -0.92
RAB5B-206ENST00000549505 PRM3Q9NNZ6 103 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 RHCGQ9UBD6 479 aa9.28□□□□□ -0.92
RAB5B-206ENST00000549505 EXOGQ9Y2C4 368 aaKnown RBP9.28□□□□□ -0.92
RAB5B-206ENST00000549505 TMA7Q9Y2S6 64 aaKnown RBP9.28□□□□□ -0.92
RAB5B-206ENST00000549505 CEP192Q8TEP8 1941 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 TRBV23OR9-2A0A075B6M9 112 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 TRAPPC13A5PLN9 417 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 SLC9B1P1A6NJY1 282 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 BOLA2-SMG1P6H3BVE0 249 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 OR10H3O60404 316 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 BCL10O95999 233 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 IFNA8P32881 189 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 GRK5P34947 590 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 MAZP56270 477 aaKnown RBP9.27□□□□□ -0.92
RAB5B-206ENST00000549505 GPLD1P80108 840 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 SHC2P98077 582 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 PSG6Q00889 435 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.27□□□□□ -0.92
RAB5B-206ENST00000549505 CLPPQ16740 277 aaPredicted RBP9.27□□□□□ -0.92
RAB5B-206ENST00000549505 VWA5B2Q8N398 1253 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 ZNF485Q8NCK3 441 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 PROKR2Q8NFJ6 384 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 OSTF1Q92882 214 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 ZDHHC12Q96GR4 267 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 SLC41A3Q96GZ6 507 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 SPACA7Q96KW9 195 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 HS6ST2Q96MM7 605 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 ZNF559Q9BR84 538 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 FN3KQ9H479 309 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 AKIP1Q9NQ31 210 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 LANCL2Q9NS86 450 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 IMPAD1Q9NX62 359 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 CA14Q9ULX7 337 aa9.27□□□□□ -0.92
RAB5B-206ENST00000549505 J3QRE1 110 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 ZBTB11O95625 1053 aaPredicted RBP9.27□□□□□ -0.93
RAB5B-206ENST00000549505 ADRA2AP08913 450 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 ANKRD34CP0C6C1 535 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 DBTP11182 482 aaKnown RBP9.27□□□□□ -0.93
RAB5B-206ENST00000549505 RORAP35398 523 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 PRKAG1P54619 331 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 POU6F2P78424 691 aaPredicted RBP9.27□□□□□ -0.93
RAB5B-206ENST00000549505 TARDBPQ13148 414 aaKnown RBP eCLIP9.27□□□□□ -0.93
RAB5B-206ENST00000549505 ARMC4Q5T2S8 1044 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 PTCHD4Q6ZW05 846 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 AHSA2Q719I0 299 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 RANBP3LQ86VV4 465 aaPredicted RBP9.27□□□□□ -0.93
RAB5B-206ENST00000549505 NANOGP1Q8N7R0 232 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 PIGXQ8TBF5 258 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 BORCS5Q969J3 196 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 ARMC7Q9H6L4 198 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 FOLH1BQ9HBA9 442 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 KRCC1Q9NPI7 259 aaPredicted RBP9.27□□□□□ -0.93
RAB5B-206ENST00000549505 PRMT8Q9NR22 394 aaPredicted RBP9.27□□□□□ -0.93
RAB5B-206ENST00000549505 RASSF1Q9NS23 344 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 SLC6A14Q9UN76 642 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 MRPS33Q9Y291 106 aaKnown RBP9.27□□□□□ -0.93
RAB5B-206ENST00000549505 KCNK2O95069 426 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 SCG5P05408 212 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 ETV6P41212 452 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 ST3GAL4Q11206 333 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 RAB40BQ12829 278 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 FGFBP1Q14512 234 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 FNDC7Q5VTL7 733 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 AADACL4Q5VUY2 407 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 ZNF620Q6ZNG0 422 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 QSOX2Q6ZRP7 698 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 PRICKLE2Q7Z3G6 844 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 C11orf74Q86VG3 221 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 OR5T3Q8NGG3 340 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 VANGL1Q8TAA9 524 aaPredicted RBP9.27□□□□□ -0.93
RAB5B-206ENST00000549505 TMEM80Q96HE8 168 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 YIPF4Q9BSR8 244 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 PRRG3Q9BZD7 231 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 TMEM5Q9Y2B1 443 aa9.27□□□□□ -0.93
RAB5B-206ENST00000549505 HEMK1Q9Y5R4 338 aaPredicted RBP9.27□□□□□ -0.93
RAB5B-206ENST00000549505 TMEM129A0AVI4 362 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 SGK494L7N484 410 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 AP3D1O14617 1153 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 ENTPD6O75354 484 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 CYC1P08574 325 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 CDH3P22223 829 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 LIPAP38571 399 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 TAS2R41P59536 307 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 BNC1Q01954 994 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 SHBQ15464 509 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 MAPK14Q16539 360 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 MINDY4Q4G0A6 757 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms