RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 METTL6Q8TCB7 284 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 ZNF845Q96IR2 970 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-218ENST00000548945 MARK4Q96L34 752 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 BBS4Q96RK4 519 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 DSN1Q9H410 356 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 PTGES2Q9H7Z7 377 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 HHATLQ9HCP6 504 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 FAM120CQ9NX05 1096 aaKnown RBP11.59□□□□□ -0.55
PTCH1-218ENST00000548945 KLHL28Q9NXS3 571 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 TAS2R7Q9NYW3 318 aa11.59□□□□□ -0.55
PTCH1-218ENST00000548945 C6orf203Q9P0P8 240 aaPredicted RBP11.59□□□□□ -0.55
PTCH1-218ENST00000548945 MRTO4Q9UKD2 239 aaKnown RBP11.59□□□□□ -0.55
PTCH1-218ENST00000548945 A0A087WUV0 522 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-218ENST00000548945 OR2M5A3KFT3 312 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 POC1B-GALNT4F8VUJ3 575 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 PSMG1O95456 288 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 LY6G6DO95868 133 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 IFI6P09912 130 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 FCGR2AP12318 317 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 CHN1P15882 459 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 H2AFXP16104 143 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-218ENST00000548945 DDCP20711 480 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 IMPDH1P20839 514 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 CCKARP32238 428 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 RPS3AP61247 264 aaKnown RBP11.58□□□□□ -0.56
PTCH1-218ENST00000548945 ZNF763Q0D2J5 394 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 ZNF155Q12901 538 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-218ENST00000548945 LCP2Q13094 533 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 GUSBP1Q15486 140 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 DECR1Q16698 335 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 TIFABQ6ZNK6 161 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 SLC22A9Q8IVM8 553 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 UBQLNLQ8IYU4 475 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 UHMK1Q8TAS1 419 aaKnown RBP11.58□□□□□ -0.56
PTCH1-218ENST00000548945 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.58□□□□□ -0.56
PTCH1-218ENST00000548945 FIG4Q92562 907 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 GFM2Q969S9 779 aaKnown RBP11.58□□□□□ -0.56
PTCH1-218ENST00000548945 C1GALT1C1Q96EU7 318 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 PIK3IP1Q96FE7 263 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 TMEM237Q96Q45 408 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 FMO2Q99518 471 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 CCL19Q99731 98 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 PIGQQ9BRB3 760 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 PINK1Q9BXM7 581 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 OPN3Q9H1Y3 402 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-218ENST00000548945 GRID1Q9ULK0 1009 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 C19orf53Q9UNZ5 99 aaPredicted RBP11.58□□□□□ -0.56
PTCH1-218ENST00000548945 WBP11Q9Y2W2 641 aaKnown RBP11.58□□□□□ -0.56
PTCH1-218ENST00000548945 ZNF337Q9Y3M9 751 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 AP4B1Q9Y6B7 739 aa11.58□□□□□ -0.56
PTCH1-218ENST00000548945 IGLV3-32A0A0A0MS00 114 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 TTC36A6NLP5 189 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 SCO2O43819 266 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 DLX3O60479 287 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 TMCC2O75069 709 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 NME6O75414 186 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-218ENST00000548945 IL33O95760 270 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 ANXA4P09525 319 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-218ENST00000548945 PPP3CBP16298 524 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 TCEA1P23193 301 aaKnown RBP11.57□□□□□ -0.56
PTCH1-218ENST00000548945 ATP5F1P24539 256 aaPredicted RBP11.57□□□□□ -0.56
PTCH1-218ENST00000548945 KCNJ5P48544 419 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 CLK3P49761 638 aaKnown RBP11.57□□□□□ -0.56
PTCH1-218ENST00000548945 SUCLG1P53597 346 aaKnown RBP11.57□□□□□ -0.56
PTCH1-218ENST00000548945 PRKAA2P54646 552 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 PSMD4P55036 377 aaKnown RBP11.57□□□□□ -0.56
PTCH1-218ENST00000548945 FAM214BQ7L5A3 538 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 CNPY4Q8N129 248 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 OR2L13Q8N349 312 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 METTL25Q8N6Q8 603 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.57□□□□□ -0.56
PTCH1-218ENST00000548945 FNDC9Q8TBE3 224 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 NUDT8Q8WV74 236 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 L3HYPDHQ96EM0 354 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 APIPQ96GX9 242 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 Q96MF0 132 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 GSX2Q9BZM3 304 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 UBTD1Q9HAC8 227 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 Q9N2J8 555 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 MED11Q9P086 117 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 STOML1Q9UBI4 398 aa11.57□□□□□ -0.56
PTCH1-218ENST00000548945 C17orf51A8MQB3 221 aa11.56□□□□□ -0.56
PTCH1-218ENST00000548945 H7C1Q1 480 aa11.56□□□□□ -0.56
PTCH1-218ENST00000548945 PAX1P15863 534 aa11.56□□□□□ -0.56
PTCH1-218ENST00000548945 TBXA2RP21731 343 aa11.56□□□□□ -0.56
PTCH1-218ENST00000548945 LOXP28300 417 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-218ENST00000548945 HTR6P50406 440 aa11.56□□□□□ -0.56
PTCH1-218ENST00000548945 NCBP2P52298 156 aaKnown RBP eCLIP11.56□□□□□ -0.56
PTCH1-218ENST00000548945 SIRPAP78324 504 aa11.56□□□□□ -0.56
PTCH1-218ENST00000548945 C17orf67Q0P5P2 114 aa11.56□□□□□ -0.56
PTCH1-218ENST00000548945 PON3Q15166 354 aa11.56□□□□□ -0.56
PTCH1-218ENST00000548945 ZNHIT3Q15649 155 aaPredicted RBP11.56□□□□□ -0.56
PTCH1-218ENST00000548945 TMEM44Q2T9K0 475 aa11.56□□□□□ -0.56
PTCH1-218ENST00000548945 FAM219BQ5XKK7 198 aa11.56□□□□□ -0.56
PTCH1-218ENST00000548945 YTHDF3Q7Z739 585 aaKnown RBP11.56□□□□□ -0.56
PTCH1-218ENST00000548945 ZNF610Q8N9Z0 462 aa11.56□□□□□ -0.56
PTCH1-218ENST00000548945 PPP1R14CQ8TAE6 165 aa11.56□□□□□ -0.56
PTCH1-218ENST00000548945 FAM76AQ8TAV0 307 aa11.56□□□□□ -0.56
PTCH1-218ENST00000548945 IFT81Q8WYA0 676 aa11.56□□□□□ -0.56
PTCH1-218ENST00000548945 LMF2Q9BU23 707 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms