RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 COMMD7Q86VX2 200 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 VN1R2Q8NFZ6 395 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 CYB5D2Q8WUJ1 264 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 MS4A3Q96HJ5 214 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 C1QTNF7Q9BXJ2 289 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 GLIPR2Q9H4G4 154 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 SEMA4GQ9NTN9 838 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 RASD1Q9Y272 281 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 FAM183AA6NL82 134 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 PI15O43692 258 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 PRKRAO75569 313 aaKnown RBP12.85□□□□□ -0.35
HDAC7-228ENST00000548938 TPPPO94811 219 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 SHC1P29353 583 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 GPR4P46093 362 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 PITPNBP48739 271 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 MTNR1BP49286 362 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 SLC7A9P82251 487 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 TMEM65Q6PI78 240 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 LIPIQ6XZB0 460 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 OAFQ86UD1 273 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 ZNF366Q8N895 744 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 OR51G2Q8NGK0 314 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 BBS10Q8TAM1 723 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 FCRL4Q96PJ5 515 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 CDCP1Q9H5V8 836 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 TAC3Q9UHF0 121 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 CCL26Q9Y258 94 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 EXOGQ9Y2C4 368 aaKnown RBP12.85□□□□□ -0.35
HDAC7-228ENST00000548938 GPR55Q9Y2T6 319 aaPredicted RBP12.85□□□□□ -0.35
HDAC7-228ENST00000548938 TEX13CA0A0J9YWL9 993 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 PPM1DO15297 605 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 MPC2O95563 127 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 RBMS1P29558 406 aaKnown RBP12.85□□□□□ -0.35
HDAC7-228ENST00000548938 MMP12P39900 470 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 OMPP47874 163 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 SOX9P48436 509 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 ZNF81P51508 661 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 EXOSC2Q13868 293 aaKnown RBP12.85□□□□□ -0.35
HDAC7-228ENST00000548938 ZNF267Q14586 743 aaPredicted RBP12.85□□□□□ -0.35
HDAC7-228ENST00000548938 LASP1Q14847 261 aaKnown RBP12.85□□□□□ -0.35
HDAC7-228ENST00000548938 PIP5KL1Q5T9C9 394 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 GPR139Q6DWJ6 353 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 LYPD4Q6UWN0 246 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 DPPA4Q7L190 304 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 TCEAL8Q8IYN2 117 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 OR5AR1Q8NGP9 310 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 NACC2Q96BF6 587 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 SORCS2Q96PQ0 1159 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 TBX5Q99593 518 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 C17orf62Q9BQA9 187 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 DPAGT1Q9H3H5 408 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 RABL2AQ9UBK7 228 aaPredicted RBP12.85□□□□□ -0.35
HDAC7-228ENST00000548938 NTNG1Q9Y2I2 539 aa12.85□□□□□ -0.35
HDAC7-228ENST00000548938 A0A1W2PRU2 124 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 LILRB3O75022 631 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 TBXA2RP21731 343 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 HTR1FP30939 366 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 CLCNKAP51800 687 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 SNTA1Q13424 505 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 COL9A2Q14055 689 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-228ENST00000548938 TMEM215Q68D42 235 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 ADGRD2Q7Z7M1 963 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 LUZP2Q86TE4 346 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 SLC51BQ86UW2 128 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 SUN3Q8TAQ9 357 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 ZFPM2Q8WW38 1151 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 AMDHD1Q96NU7 426 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 ZDHHC5Q9C0B5 715 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 KCNN2Q9H2S1 579 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 HINT3Q9NQE9 182 aaKnown RBP12.84□□□□□ -0.35
HDAC7-228ENST00000548938 TNFRSF10DQ9UBN6 386 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 ASF1AQ9Y294 204 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 COL4A3Q01955 1670 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 ZC3H12DA2A288 527 aaKnown RBP12.84□□□□□ -0.35
HDAC7-228ENST00000548938 GLOD5A6NK44 160 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 FGF18O76093 207 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 TCRBP04435 133 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 LINC00271P0C7V0 271 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 PSMB5P28074 263 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 ACSL1P33121 698 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 IFNGR2P38484 337 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 RFX3P48380 749 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 KHKP50053 298 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 SRP54P61011 504 aaKnown RBP12.84□□□□□ -0.35
HDAC7-228ENST00000548938 MFSD13AQ14CX5 517 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 COL28A1Q2UY09 1125 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 PGGHGQ32M88 737 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 LGALSLQ3ZCW2 172 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-228ENST00000548938 SLC36A2Q495M3 483 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 CD276Q5ZPR3 534 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 ADIPOR2Q86V24 386 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 ZNF547Q8IVP9 402 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 C7orf57Q8NEG2 295 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 BEST4Q8NFU0 473 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 SPATA5L1Q9BVQ7 753 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 C12orf10Q9HB07 376 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 BCL2L10Q9HD36 194 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 ACSS1Q9NUB1 689 aaPredicted RBP12.84□□□□□ -0.35
HDAC7-228ENST00000548938 KCNE3Q9Y6H6 103 aa12.84□□□□□ -0.35
HDAC7-228ENST00000548938 CXorf51AA0A1B0GTR3 108 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms