RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 POU4F3Q15319 338 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 EEF1A1P5Q5VTE0 462 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 ANKRD26P1Q6NSI1 321 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 VWA1Q6PCB0 445 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 ZNF551Q7Z340 670 aaPredicted RBP15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 TDRPQ86YL5 185 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 OR2T11Q8NH01 316 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 FIG4Q92562 907 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 HOXB13Q92826 284 aaPredicted RBP15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 C1GALT1C1Q96EU7 318 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 METTL2AQ96IZ6 378 aaKnown RBP15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 FCRL1Q96LA6 429 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 DLL4Q9NR61 685 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 SDHAF3Q9NRP4 125 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 NAV3Q8IVL0 2385 aa15.7■□□□□ 0.1
CHMP1A-205ENST00000548650 VPS13CQ709C8 3753 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 IGLV3-32A0A0A0MS00 114 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 OR2M5A3KFT3 312 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 MSTNO14793 375 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 PDPK1O15530 556 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 IGKV1D-16P01601 117 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 CPA3P15088 417 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 SDC1P18827 310 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 CCKARP32238 428 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 ADAM8P78325 824 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 HSPB3Q12988 150 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 PCLAFQ15004 111 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 ZNHIT3Q15649 155 aaPredicted RBP15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 DEFB113Q30KQ7 82 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 LIPMQ5VYY2 423 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 OR2A2Q6IF42 318 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 P4HA3Q7Z4N8 544 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 MARCH3Q86UD3 253 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 MEIOBQ8N635 442 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 EIF1ADQ8N9N8 165 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 OR5M1Q8NGP8 315 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 EPS8L3Q8TE67 593 aaKnown RBP15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 SMPDL3BQ92485 455 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 CIDECQ96AQ7 238 aaPredicted RBP15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 STARD4Q96DR4 205 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 CCT7Q99832 543 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 PPCSQ9HAB8 311 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 LRTM1Q9HBL6 345 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 EQTNQ9NQ60 294 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 ZNF337Q9Y3M9 751 aa15.69■□□□□ 0.1
CHMP1A-205ENST00000548650 GXYLT2A0PJZ3 443 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 SMIM23A6NLE4 172 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 COPEO14579 308 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 SEC14L5O43304 696 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 SEC22BO75396 215 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 UTS2O95399 124 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 MAP3K8P41279 467 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 RFX3P48380 749 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 CCT5P48643 541 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 SUCLG1P53597 346 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 PDE7AQ13946 482 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 KEAP1Q14145 624 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 ZNF385BQ569K4 471 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 APOOLQ6UXV4 268 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 RNF165Q6ZSG1 346 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 CNEP1R1Q8N9A8 125 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 CCDC63Q8NA47 563 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 UBLCP1Q8WVY7 318 aaPredicted RBP15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 PIK3R3Q92569 461 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 GFM2Q969S9 779 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 POM121Q96HA1 1249 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 PINK1Q9BXM7 581 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 TUBB1Q9H4B7 451 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 PTGES2Q9H7Z7 377 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 C1orf109Q9NX04 203 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 MRTO4Q9UKD2 239 aaKnown RBP15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 ZNF175Q9Y473 711 aa15.68■□□□□ 0.1
CHMP1A-205ENST00000548650 RAI1Q7Z5J4 1906 aaPredicted RBP15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 TTC36A6NLP5 189 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 H3BML4 177 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 LINC01387J3KSC0 135 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 TBX19O60806 448 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 SMNDC1O75940 238 aaKnown RBP eCLIP15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 NEFHP12036 1026 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 KRT4P19013 534 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 GABRA3P34903 492 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 KIR2DL2P43627 348 aaPredicted RBP15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 PCYT1AP49585 367 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 PSMD4P55036 377 aaKnown RBP15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 CLDN20P56880 219 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 PRR5P85299 388 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 TMEM44Q2T9K0 475 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 GRAMD1BQ3KR37 738 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 KRTAP21-3Q3LHN1 58 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 KANK2Q63ZY3 851 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 ZNF474Q6S9Z5 364 aaPredicted RBP15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 Q6ZSR9 355 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 CHMP1BQ7LBR1 199 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 BTLAQ7Z6A9 289 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 KRTAP1-3Q8IUG1 177 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 C10orf107Q8IVU9 208 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 C4orf33Q8N1A6 199 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 FNDC9Q8TBE3 224 aa15.67■□□□□ 0.1
CHMP1A-205ENST00000548650 DUSP19Q8WTR2 217 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms