RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CDC42P60953 191 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 EEF1A1P68104 462 aaKnown RBP12.48□□□□□ -0.41
PTCH1-215ENST00000547672 IL5RAQ01344 420 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 RHAGQ02094 409 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 ALDH6A1Q02252 535 aaKnown RBP12.48□□□□□ -0.41
PTCH1-215ENST00000547672 ILKQ13418 452 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 GANABQ14697 944 aaKnown RBP12.48□□□□□ -0.41
PTCH1-215ENST00000547672 ZNF141Q15928 474 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.48□□□□□ -0.41
PTCH1-215ENST00000547672 PLEKHM3Q6ZWE6 761 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 OVCH1Q7RTY7 1134 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 VRK2Q86Y07 508 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 CDK20Q8IZL9 346 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 RNF113BQ8IZP6 322 aaKnown RBP12.48□□□□□ -0.41
PTCH1-215ENST00000547672 ZNF615Q8N8J6 731 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 AQP11Q8NBQ7 271 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 OR6T1Q8NGN1 323 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 GNPDA2Q8TDQ7 276 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 RHBDD1Q8TEB9 315 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 TRUB1Q8WWH5 349 aaKnown RBP12.48□□□□□ -0.41
PTCH1-215ENST00000547672 HS6ST2Q96MM7 605 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 MCHR1Q99705 422 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 ADNPQ9H2P0 1102 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 TMEM27Q9HBJ8 222 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 FBXO8Q9NRD0 319 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 C19orf25Q9UFG5 118 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-215ENST00000547672 TESQ9UGI8 421 aaKnown RBP12.48□□□□□ -0.41
PTCH1-215ENST00000547672 MKL2Q9ULH7 1088 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 TMEM184BQ9Y519 407 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-215ENST00000547672 PCDH15Q96QU1 1955 aa12.48□□□□□ -0.41
PTCH1-215ENST00000547672 ARID1BQ8NFD5 2236 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-215ENST00000547672 MYOCOSA0A1B0GUC4 107 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 TRAPPC13A5PLN9 417 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 HTR3EA5X5Y0 456 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 CDHR4A6H8M9 788 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 D6RAR5 112 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 M0R3H8 397 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 FFAR1O14842 300 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 GALR2O43603 387 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-215ENST00000547672 RECKO95980 971 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 HEXBP07686 556 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 OSMP13725 252 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 HPGDP15428 266 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 EEF1B2P24534 225 aaKnown RBP12.47□□□□□ -0.41
PTCH1-215ENST00000547672 ELAVL4P26378 380 aaKnown RBP12.47□□□□□ -0.41
PTCH1-215ENST00000547672 SSTR4P31391 388 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 SOX18P35713 384 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 GGT2P36268 569 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 SH3BGRP55822 239 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-215ENST00000547672 ISL1P61371 349 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 PSG6Q00889 435 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 ZFP36L1Q07352 338 aaKnown RBP12.47□□□□□ -0.41
PTCH1-215ENST00000547672 PIN1Q13526 163 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-215ENST00000547672 PLA2G2CQ5R387 149 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 BROXQ5VW32 411 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 SLC29A4Q7RTT9 530 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 C17orf47Q8NEP4 570 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 C16orf52Q8NHV5 167 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 PIGXQ8TBF5 258 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 ADAMTS16Q8TE57 1224 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 PTPMT1Q8WUK0 201 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-215ENST00000547672 FBLIM1Q8WUP2 373 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 IPCEF1Q8WWN9 437 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-215ENST00000547672 PIK3R3Q92569 461 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 ZNF566Q969W8 418 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 Q96MT0 163 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 CDC6Q99741 560 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 PRRG3Q9BZD7 231 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 TRIM2Q9C040 744 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 STRADBQ9C0K7 418 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 HHATLQ9HCP6 504 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 FSCN3Q9NQT6 498 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 IMPAD1Q9NX62 359 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 SELENONQ9NZV5 590 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 GPN3Q9UHW5 284 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-215ENST00000547672 SLC35A3Q9Y2D2 325 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 GPR55Q9Y2T6 319 aaPredicted RBP12.47□□□□□ -0.41
PTCH1-215ENST00000547672 SNX5Q9Y5X3 404 aa12.47□□□□□ -0.41
PTCH1-215ENST00000547672 FRG2CA6NGY1 282 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 TRIM64CA6NLI5 447 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 TGFBR3LH3BV60 316 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 MITFO75030 526 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-215ENST00000547672 CPNE3O75131 537 aaKnown RBP12.46□□□□□ -0.41
PTCH1-215ENST00000547672 GASTP01350 101 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 ZGLP1P0C6A0 271 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 CDK4P11802 303 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 CRISP1P54107 249 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 SLC37A1P57057 533 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 MC2RQ01718 297 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 TARDBPQ13148 414 aaKnown RBP eCLIP12.46□□□□□ -0.41
PTCH1-215ENST00000547672 CDK5R2Q13319 367 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 APOFQ13790 326 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 C1orf189Q5VU69 101 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 ZNF770Q6IQ21 691 aaPredicted RBP12.46□□□□□ -0.41
PTCH1-215ENST00000547672 C1orf94Q6P1W5 598 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 PODNL1Q6PEZ8 512 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 ZNF613Q6PF04 617 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 FIGNL1Q6PIW4 674 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 ZNF730Q6ZMV8 503 aa12.46□□□□□ -0.41
PTCH1-215ENST00000547672 ZNF836Q6ZNA1 936 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms