RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 SDF2L1Q9HCN8 221 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 HOXC10Q9NYD6 342 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 RDH8Q9NYR8 311 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 TMEM181Q9P2C4 612 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 KLK11Q9UBX7 282 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 B9D1Q9UPM9 204 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 RRP15Q9Y3B9 282 aaKnown RBP3.46□□□□□ -1.86
SNHG1-222ENST00000545308 PLXNB2O15031 1838 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 LTBP2Q14767 1821 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 COL4A1P02462 1669 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 MAST2Q6P0Q8 1798 aa3.46□□□□□ -1.86
SNHG1-222ENST00000545308 KIF16BQ96L93 1317 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 DOCK2Q92608 1830 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 ATAD5Q96QE3 1844 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 G3V2L1 256 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 H3BMH7 237 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 XPO1O14980 1071 aaKnown RBP3.45□□□□□ -1.86
SNHG1-222ENST00000545308 BUB1O43683 1085 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 GMFGO60234 142 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 IQCF3P0C7M6 154 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 PDHBP11177 359 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 MBL2P11226 248 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-222ENST00000545308 TNNI3P19429 210 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 CHRNB4P30926 498 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 MATKP42679 507 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 GYG1P46976 350 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 ZFP36L2P47974 494 aaKnown RBP3.45□□□□□ -1.86
SNHG1-222ENST00000545308 GBX2P52951 348 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-222ENST00000545308 GNB1P62873 340 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 GSTO1P78417 241 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 RPL36AP83881 106 aaKnown RBP3.45□□□□□ -1.86
SNHG1-222ENST00000545308 RBBP4Q09028 425 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 CHIT1Q13231 466 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 FAM189A2Q15884 450 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 HKDC1Q2TB90 917 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 SLC36A3Q495N2 470 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 CEP55Q53EZ4 464 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 TCHHL1Q5QJ38 904 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-222ENST00000545308 C1orf189Q5VU69 101 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 PWWP2BQ6NUJ5 590 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 NIPAL3Q6P499 406 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 BHLHB9Q6PI77 547 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 FIP1L1Q6UN15 594 aaKnown RBP3.45□□□□□ -1.86
SNHG1-222ENST00000545308 CBLN3Q6UW01 205 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 CWC27Q6UX04 472 aaKnown RBP3.45□□□□□ -1.86
SNHG1-222ENST00000545308 CHMP1BQ7LBR1 199 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 OR2T3Q8NH03 318 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 ZNF501Q96CX3 271 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-222ENST00000545308 TTC25Q96NG3 672 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 NODALQ96S42 347 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 ZSCAN5AQ9BUG6 496 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 DCTPP1Q9H773 170 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 GORASP2Q9H8Y8 452 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 MTHFD2LQ9H903 347 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-222ENST00000545308 PLEKHA3Q9HB20 300 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 C2orf42Q9NWW7 574 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 KLHL8Q9P2G9 620 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-222ENST00000545308 CTNNA3Q9UI47 895 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 LNPEPQ9UIQ6 1025 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 ICAM5Q9UMF0 924 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 CHMP2BQ9UQN3 213 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 MRPS18CQ9Y3D5 142 aaKnown RBP3.45□□□□□ -1.86
SNHG1-222ENST00000545308 CSNK1G3Q9Y6M4 447 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 RNF215Q9Y6U7 377 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 GBF1Q92538 1859 aa3.45□□□□□ -1.86
SNHG1-222ENST00000545308 SF3B1O75533 1304 aaKnown RBP eCLIP3.44□□□□□ -1.868e-10■■■■■ 30
SNHG1-222ENST00000545308 IGHV3-20A0A0C4DH32 117 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 ZNF724A8MTY0 619 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 H0YL77 283 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 TNFSF12O43508 249 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 ZNF821O75541 412 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-222ENST00000545308 GAS8-AS1O95177 125 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 IGKV5-2P06315 115 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 TSPAN8P19075 237 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 HMGCS2P54868 508 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 ABCE1P61221 599 aaKnown RBP3.44□□□□□ -1.86
SNHG1-222ENST00000545308 UBE2HP62256 183 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 CDKL1Q00532 357 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 DHODHQ02127 395 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 CNTN2Q02246 1040 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 GPM6BQ13491 265 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 EXOSC2Q13868 293 aaKnown RBP3.44□□□□□ -1.86
SNHG1-222ENST00000545308 WDR43Q15061 677 aaKnown RBP eCLIP3.44□□□□□ -1.86
SNHG1-222ENST00000545308 SGSM1Q2NKQ1 1148 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 ADAMTSL4-AS1Q5T5F5 129 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 ATAD3BQ5T9A4 648 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 GFI1BQ5VTD9 330 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 RHBDD2Q6NTF9 364 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 LRRC8BQ6P9F7 803 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 VASH2Q86V25 355 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 GPBP1Q86WP2 473 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 CBWD2Q8IUF1 395 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 NFAM1Q8NET5 270 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-222ENST00000545308 OR6F1Q8NGZ6 308 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 OR4F5Q8NH21 305 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 PHOSPHO2Q8TCD6 241 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 GIPC3Q8TF64 312 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 OSTF1Q92882 214 aa3.44□□□□□ -1.86
SNHG1-222ENST00000545308 GMPPAQ96IJ6 420 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-222ENST00000545308 GLT1D1Q96MS3 346 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms