RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 CCKARP32238 428 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 KIR2DL2P43627 348 aaPredicted RBP12.73□□□□□ -0.37
DDX11-228ENST00000545115 TPD52P55327 224 aaPredicted RBP12.73□□□□□ -0.37
DDX11-228ENST00000545115 CLDN15P56746 228 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 SIRPAP78324 504 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 LTBQ06643 244 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 FGFBP1Q14512 234 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 PRSS53Q2L4Q9 553 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 ZNF474Q6S9Z5 364 aaPredicted RBP12.73□□□□□ -0.37
DDX11-228ENST00000545115 LRRC75A-AS1Q8N1F1 130 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 CCNYL1Q8N7R7 359 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 FAM76AQ8TAV0 307 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.73□□□□□ -0.37
DDX11-228ENST00000545115 ZNF592Q92610 1267 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 PIGTQ969N2 578 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 CCDC126Q96EE4 140 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 ZNF845Q96IR2 970 aaPredicted RBP12.73□□□□□ -0.37
DDX11-228ENST00000545115 PIP5K1AQ99755 562 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 SMR3AQ99954 134 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 SLC39A3Q9BRY0 314 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 OPN3Q9H1Y3 402 aaPredicted RBP12.73□□□□□ -0.37
DDX11-228ENST00000545115 RNF122Q9H9V4 155 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 ELOVL5Q9NYP7 299 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 FLRT3Q9NZU0 649 aa12.73□□□□□ -0.37
DDX11-228ENST00000545115 PSMC3IPQ9P2W1 217 aaPredicted RBP12.73□□□□□ -0.37
DDX11-228ENST00000545115 WBP11Q9Y2W2 641 aaKnown RBP12.73□□□□□ -0.37
DDX11-228ENST00000545115 POLR3HQ9Y535 204 aaPredicted RBP12.73□□□□□ -0.37
DDX11-228ENST00000545115 ABCA2Q9BZC7 2435 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 MAP1AP78559 2803 aaPredicted RBP12.72□□□□□ -0.37
DDX11-228ENST00000545115 OR2M5A3KFT3 312 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 TTC36A6NLP5 189 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 H3BQF6 201 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 UBFD1O14562 309 aaKnown RBP12.72□□□□□ -0.37
DDX11-228ENST00000545115 SIAH2O43255 324 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 SMPD2O60906 423 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 RSL1D1O76021 490 aaKnown RBP12.72□□□□□ -0.37
DDX11-228ENST00000545115 CGAP01215 116 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 IFI6P09912 130 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 CD8BP10966 210 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 PYGBP11216 843 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 CRYGSP22914 178 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 UGT2B10P36537 528 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 RFX3P48380 749 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 KCNJ5P48544 419 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 RPS3AP61247 264 aaKnown RBP12.72□□□□□ -0.37
DDX11-228ENST00000545115 NAA20P61599 178 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 OCRLQ01968 901 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 PON3Q15166 354 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 GLYR1Q49A26 553 aaPredicted RBP12.72□□□□□ -0.37
DDX11-228ENST00000545115 Q5PR19 223 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 IKBIPQ70UQ0 350 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 MARCH3Q86UD3 253 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 P3H2Q8IVL5 708 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 METTL25Q8N6Q8 603 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 FNDC9Q8TBE3 224 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 DUSP19Q8WTR2 217 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 GFM2Q969S9 779 aaKnown RBP12.72□□□□□ -0.37
DDX11-228ENST00000545115 ELP4Q96EB1 424 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 C1GALT1C1Q96EU7 318 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 PIK3IP1Q96FE7 263 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 AMDHD1Q96NU7 426 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 LMF2Q9BU23 707 aaKnown RBP12.72□□□□□ -0.37
DDX11-228ENST00000545115 TBL1XR1Q9BZK7 514 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 RTN4RQ9BZR6 473 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 C3orf14Q9HBI5 128 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 DCDC2Q9UHG0 476 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 VPS13CQ709C8 3753 aa12.72□□□□□ -0.37
DDX11-228ENST00000545115 FAM171A2A8MVW0 826 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 C16orf97H3BN30 126 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 CRCPO75575 148 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 KCNH1O95259 989 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 MYL2P10916 166 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 FCGR2AP12318 317 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 FPR1P21462 350 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 CLDN20P56880 219 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 C17orf67Q0P5P2 114 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 CLEC9AQ6UXN8 241 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 ZYG11AQ6WRX3 759 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 Q71RC1 249 aaPredicted RBP12.71□□□□□ -0.37
DDX11-228ENST00000545115 TRIM46Q7Z4K8 759 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 OR5M1Q8NGP8 315 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 ZNF395Q9H8N7 513 aaPredicted RBP12.71□□□□□ -0.37
DDX11-228ENST00000545115 RRAGDQ9NQL2 400 aaPredicted RBP12.71□□□□□ -0.37
DDX11-228ENST00000545115 TBK1Q9UHD2 729 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 PROCRQ9UNN8 238 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 AP4B1Q9Y6B7 739 aa12.71□□□□□ -0.37
DDX11-228ENST00000545115 IGLV3-32A0A0A0MS00 114 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 G3V2L1 256 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 GLRA3O75311 464 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 UTS2O95399 124 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 ANGPTL1O95841 491 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 PRR5P85299 388 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 SLC29A2Q14542 456 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 GUSBP1Q15486 140 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 ACKR1Q16570 336 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 SGCBQ16585 318 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 NOXRED1Q6NXP6 359 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 FRMD7Q6ZUT3 714 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 FAM214BQ7L5A3 538 aa12.7□□□□□ -0.38
DDX11-228ENST00000545115 MZB1Q8WU39 189 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms