RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 STACQ99469 402 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 SORT1Q99523 831 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 SPOCK3Q9BQ16 436 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 DUSP26Q9BV47 211 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 TBL1XR1Q9BZK7 514 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 AKTIPQ9H8T0 292 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 CALHM2Q9HA72 323 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 MEAF6Q9HAF1 191 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 TMBIM4Q9HC24 238 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 EQTNQ9NQ60 294 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 SERHLQ9NQF3 203 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 DUSP22Q9NRW4 184 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 ARGLU1Q9NWB6 273 aaPredicted RBP10.76□□□□□ -0.69
HDAC4-216ENST00000544989 TAS2R10Q9NYW0 307 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 DKKL1Q9UK85 242 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 RNF6Q9Y252 685 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 FAM215AQ9Y5M1 114 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 HRH3Q9Y5N1 445 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 CACNA1CQ13936 2221 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 FADS1O60427 444 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 EPPINO95925 133 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 IL2RAP01589 272 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 LAMP1P11279 417 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 G6PDP11413 515 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 CPN1P15169 458 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 HPGDP15428 266 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 BMP7P18075 431 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 LBPP18428 481 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 CHMP24386 653 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 TIMP3P35625 211 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 PEX19P40855 299 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 GAS1P54826 345 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 C17orf67Q0P5P2 114 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 BST1Q10588 318 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 TP53BP2Q13625 1128 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 MPP2Q14168 576 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.75□□□□□ -0.69
HDAC4-216ENST00000544989 SPDYE7PQ495Y7 208 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 GLYR1Q49A26 553 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-216ENST00000544989 EIPR1Q53HC9 387 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 WIPI1Q5MNZ9 446 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-216ENST00000544989 AGBL2Q5U5Z8 902 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 ANXA8L1Q5VT79 327 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 NSUN5P2Q63ZY6 315 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 RTL6Q6ICC9 239 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 MFSD12Q6NUT3 480 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 GDF7Q7Z4P5 450 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 MISPQ8IVT2 679 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 GOT1L1Q8NHS2 421 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-216ENST00000544989 ZPLD1Q8TCW7 415 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 SLC9A6Q92581 669 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 TLCD1Q96CP7 247 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 FAM120BQ96EK7 910 aaKnown RBP10.75□□□□□ -0.69
HDAC4-216ENST00000544989 GIMAP5Q96F15 307 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 RMND5BQ96G75 393 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-216ENST00000544989 UGT2B28Q9BY64 529 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 DPY30Q9C005 99 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 ZCCHC3Q9NUD5 404 aaKnown RBP10.75□□□□□ -0.69
HDAC4-216ENST00000544989 STOML1Q9UBI4 398 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 PCDHGB4Q9UN71 923 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 FAF1Q9UNN5 650 aaPredicted RBP10.75□□□□□ -0.69
HDAC4-216ENST00000544989 SNX8Q9Y5X2 465 aa10.75□□□□□ -0.69
HDAC4-216ENST00000544989 DNHD1Q96M86 4753 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 PKDREJQ9NTG1 2253 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 IGLV3-32A0A0A0MS00 114 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 CD8B2A6NJW9 211 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 DUXAA6NLW8 204 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 RNASET2O00584 256 aaKnown RBP10.74□□□□□ -0.69
HDAC4-216ENST00000544989 DVL2O14641 736 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 HDAC3O15379 428 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 CFLARO15519 480 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 UTS2O95399 124 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 POU3F2P20265 443 aaPredicted RBP10.74□□□□□ -0.69
HDAC4-216ENST00000544989 DPP4P27487 766 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 MSX1P28360 303 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 RFX3P48380 749 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 CCT3P49368 545 aaKnown RBP10.74□□□□□ -0.69
HDAC4-216ENST00000544989 DIO3P55073 304 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 EEF1A1P68104 462 aaKnown RBP10.74□□□□□ -0.69
HDAC4-216ENST00000544989 POU6F2P78424 691 aaPredicted RBP10.74□□□□□ -0.69
HDAC4-216ENST00000544989 LRRC74AQ0VAA2 488 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 CASP8Q14790 479 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 BCL2A1Q16548 175 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 ACSF3Q4G176 576 aaPredicted RBP10.74□□□□□ -0.69
HDAC4-216ENST00000544989 EEF1A1P5Q5VTE0 462 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 CES4AQ5XG92 561 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 DESI1Q6ICB0 168 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 OGFOD2Q6N063 350 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 NCCRP1Q6ZVX7 275 aaPredicted RBP10.74□□□□□ -0.69
HDAC4-216ENST00000544989 SPATA19Q7Z5L4 167 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 YRDCQ86U90 279 aaKnown RBP10.74□□□□□ -0.69
HDAC4-216ENST00000544989 COX18Q8N8Q8 333 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 FADS6Q8N9I5 356 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 ZNF527Q8NB42 609 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 OR8J2Q8NGG1 315 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 JADE3Q92613 823 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 TESCQ96BS2 214 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 CHMP6Q96FZ7 201 aa10.74□□□□□ -0.69
HDAC4-216ENST00000544989 SFXN2Q96NB2 322 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms