RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 ACSF3Q4G176 576 aaPredicted RBP1.61□□□□□ -2.15
KNTC1-213ENST00000542727 WSCD1Q658N2 575 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 ZNF562Q6V9R5 426 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 HACD2Q6Y1H2 254 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 C1orf186Q6ZWK4 172 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 MOB1BQ7L9L4 216 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 NET1Q7Z628 596 aaPredicted RBP1.61□□□□□ -2.15
KNTC1-213ENST00000542727 C9orf40Q8IXQ3 194 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 CCDC36Q8IYA8 594 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 U2AF1L4Q8WU68 220 aaKnown RBP1.61□□□□□ -2.15
KNTC1-213ENST00000542727 VPS39Q96JC1 886 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 ELMO2Q96JJ3 720 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 PTGES2Q9H7Z7 377 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 ISG20L2Q9H9L3 353 aaKnown RBP1.61□□□□□ -2.15
KNTC1-213ENST00000542727 ANO10Q9NW15 660 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 C1orf123Q9NWV4 160 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.61□□□□□ -2.15
KNTC1-213ENST00000542727 CNOT2Q9NZN8 540 aaKnown RBP1.61□□□□□ -2.15
KNTC1-213ENST00000542727 P2RX2Q9UBL9 471 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 SPASTQ9UBP0 616 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 APOBEC3BQ9UH17 382 aaKnown RBP1.61□□□□□ -2.15
KNTC1-213ENST00000542727 IL20RAQ9UHF4 553 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 DUSP12Q9UNI6 340 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 PPIAL4AQ9Y536 164 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 FLVCR1Q9Y5Y0 555 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 ZNFX1Q9P2E3 1918 aaKnown RBP1.61□□□□□ -2.15
KNTC1-213ENST00000542727 ABCC4O15439 1325 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 SCN2AQ99250 2005 aa1.61□□□□□ -2.15
KNTC1-213ENST00000542727 METP08581 1390 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 NACAE9PAV3 2078 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 SAGE2PA6NJ88 616 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 LGALS8O00214 317 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 WWP2O00308 870 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 PDXKO00764 312 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 ALOX15BO15296 676 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 STAM2O75886 525 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 SERF1AO75920 110 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 TOXO94900 526 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 MT-ATP6P00846 226 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 JCHAINP01591 159 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 MT-ND3P03897 115 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 CCNA2P20248 432 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 IGFBP5P24593 272 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 DHPSP49366 369 aaPredicted RBP1.6□□□□□ -2.15
KNTC1-213ENST00000542727 NOVA1P51513 510 aaKnown RBP1.6□□□□□ -2.15
KNTC1-213ENST00000542727 RIPK4P57078 832 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 GABPB1Q06547 395 aaPredicted RBP1.6□□□□□ -2.15
KNTC1-213ENST00000542727 DPYSQ14117 519 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 TEX44Q53QW1 395 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 UFSP1Q6NVU6 142 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 FAM159AQ6UWV7 190 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 CYS1Q717R9 158 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 LPCAT2Q7L5N7 544 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 TGIF2LYQ8IUE0 185 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 C14orf178Q8N769 122 aaPredicted RBP1.6□□□□□ -2.15
KNTC1-213ENST00000542727 OR2T33Q8NG76 320 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 OR10H4Q8NGA5 316 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 LINC01006Q8NI28 216 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 TRUB1Q8WWH5 349 aaKnown RBP1.6□□□□□ -2.15
KNTC1-213ENST00000542727 SLC13A3Q8WWT9 602 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 PSMG2Q969U7 264 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 NOL4LQ96MY1 436 aaPredicted RBP1.6□□□□□ -2.15
KNTC1-213ENST00000542727 DPH7Q9BTV6 452 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 NFKBIZQ9BYH8 718 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 Q9H3A6 140 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 RPAP3Q9H6T3 665 aaPredicted RBP1.6□□□□□ -2.15
KNTC1-213ENST00000542727 KAT8Q9H7Z6 458 aaKnown RBP1.6□□□□□ -2.15
KNTC1-213ENST00000542727 ZNF702PQ9H963 129 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 RBM28Q9NW13 759 aaKnown RBP1.6□□□□□ -2.15
KNTC1-213ENST00000542727 UTP6Q9NYH9 597 aaKnown RBP1.6□□□□□ -2.15
KNTC1-213ENST00000542727 PDE10AQ9Y233 779 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 CA5BQ9Y2D0 317 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 PLEKHA6Q9Y2H5 1048 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 EXOSC1Q9Y3B2 195 aaKnown RBP1.6□□□□□ -2.15
KNTC1-213ENST00000542727 KNSTRNQ9Y448 316 aa1.6□□□□□ -2.15
KNTC1-213ENST00000542727 FAM231BA6NCW3 169 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 ZSCAN5BA6NJL1 495 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 FAM74A7A6NL05 159 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 DHRS7CA6NNS2 312 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 H3BTX0 84 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 FCN1O00602 326 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 LATO43561 262 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 SCRG1O75711 98 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 CXCL10P02778 98 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 IGKV3-11P04433 115 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 ALPPP05187 535 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 HOXC4P09017 264 aaPredicted RBP1.59□□□□□ -2.15
KNTC1-213ENST00000542727 OR8U8P0C7N1 319 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 ALPPL2P10696 532 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 ELK1P19419 428 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 VDAC1P21796 283 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 PTPN6P29350 595 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 EMDP50402 254 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 SLC26A2P50443 739 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 ZP4Q12836 540 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 SNX1Q13596 522 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 EXOSC2Q13868 293 aaKnown RBP1.59□□□□□ -2.15
KNTC1-213ENST00000542727 TFDP1Q14186 410 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 HERPUD1Q15011 391 aa1.59□□□□□ -2.15
KNTC1-213ENST00000542727 ZSWIM7Q19AV6 140 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms