RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 DTX4Q9Y2E6 619 aa25.73■■□□□ 1.71
CCM2-218ENST00000541586 CDC14CA4D256 554 aa25.72■■□□□ 1.71
CCM2-218ENST00000541586 PSG6Q00889 435 aa25.72■■□□□ 1.71
CCM2-218ENST00000541586 FOXK2Q01167 660 aa25.72■■□□□ 1.71
CCM2-218ENST00000541586 ZNHIT3Q15649 155 aaPredicted RBP25.72■■□□□ 1.71
CCM2-218ENST00000541586 DCST2Q5T1A1 773 aa25.72■■□□□ 1.71
CCM2-218ENST00000541586 CCNJQ5T5M9 372 aa25.72■■□□□ 1.71
CCM2-218ENST00000541586 WLSQ5T9L3 541 aa25.72■■□□□ 1.71
CCM2-218ENST00000541586 BROXQ5VW32 411 aa25.72■■□□□ 1.71
CCM2-218ENST00000541586 CCDC81Q6ZN84 652 aa25.72■■□□□ 1.71
CCM2-218ENST00000541586 FRRS1Q6ZNA5 592 aa25.72■■□□□ 1.71
CCM2-218ENST00000541586 APOBEC4Q8WW27 367 aaKnown RBP25.72■■□□□ 1.71
CCM2-218ENST00000541586 VNN3Q9NY84 501 aa25.72■■□□□ 1.71
CCM2-218ENST00000541586 HS3ST3B1Q9Y662 390 aa25.72■■□□□ 1.71
CCM2-218ENST00000541586 CLCA3PQ9Y6N3 262 aa25.72■■□□□ 1.71
CCM2-218ENST00000541586 IGHEP01854 428 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 ANKRD37Q7Z713 158 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 PACRGLQ8N7B6 248 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 OR7G1Q8NGA0 311 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 C16orf52Q8NHV5 167 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 PROX1Q92786 737 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 ZG16BQ96DA0 208 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 FBXL20Q96IG2 436 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 ZNF354BQ96LW1 612 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 MKLN1Q9UL63 735 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 GXYLT2A0PJZ3 443 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 DYRK3O43781 588 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 SOX30O94993 753 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 RASAL1O95294 804 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 ACADSP16219 412 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 TLE3Q04726 772 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 PPP1R8Q12972 351 aaKnown RBP25.71■■□□□ 1.71
CCM2-218ENST00000541586 TYW3Q6IPR3 259 aaKnown RBP25.71■■□□□ 1.71
CCM2-218ENST00000541586 TBPL2Q6SJ96 375 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 TMEM205Q6UW68 189 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 RAB43Q86YS6 212 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 ZSCAN1Q8NBB4 408 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 AMBRA1Q9C0C7 1298 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 ZNF350Q9GZX5 532 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 C19orf25Q9UFG5 118 aaPredicted RBP25.71■■□□□ 1.71
CCM2-218ENST00000541586 WDR45Q9Y484 360 aa25.71■■□□□ 1.71
CCM2-218ENST00000541586 TMEM8BA6NDV4 472 aa25.7■■□□□ 1.7
CCM2-218ENST00000541586 ZNF891A8MT65 544 aaPredicted RBP25.7■■□□□ 1.7
CCM2-218ENST00000541586 ALPPP05187 535 aa25.7■■□□□ 1.7
CCM2-218ENST00000541586 ATP6V1C1P21283 382 aa25.7■■□□□ 1.7
CCM2-218ENST00000541586 POU6F2P78424 691 aaPredicted RBP25.7■■□□□ 1.7
CCM2-218ENST00000541586 KCNC4Q03721 635 aa25.7■■□□□ 1.7
CCM2-218ENST00000541586 KIRREL2Q6UWL6 708 aa25.7■■□□□ 1.7
CCM2-218ENST00000541586 CPEB2Q7Z5Q1 589 aaKnown RBP25.7■■□□□ 1.7
CCM2-218ENST00000541586 PPP1R32Q7Z5V6 425 aa25.7■■□□□ 1.7
CCM2-218ENST00000541586 TMEM179BQ7Z7N9 219 aa25.7■■□□□ 1.7
CCM2-218ENST00000541586 ZDHHC13Q8IUH4 622 aa25.7■■□□□ 1.7
CCM2-218ENST00000541586 ZNF321PQ8N8H1 164 aa25.7■■□□□ 1.7
CCM2-218ENST00000541586 MAGED1Q9Y5V3 778 aaPredicted RBP25.7■■□□□ 1.7
CCM2-218ENST00000541586 U3KQV3 271 aa25.7■■□□□ 1.7
CCM2-218ENST00000541586 C7orf72A4D263 438 aa25.69■■□□□ 1.7
CCM2-218ENST00000541586 H0YJX3 145 aa25.69■■□□□ 1.7
CCM2-218ENST00000541586 SOCS6O14544 535 aa25.69■■□□□ 1.7
CCM2-218ENST00000541586 EI24O14681 340 aa25.69■■□□□ 1.7
CCM2-218ENST00000541586 E2F6O75461 281 aa25.69■■□□□ 1.7
CCM2-218ENST00000541586 DDAH2O95865 285 aa25.69■■□□□ 1.7
CCM2-218ENST00000541586 AK1P00568 194 aa25.69■■□□□ 1.7
CCM2-218ENST00000541586 PABPC4LP0CB38 370 aaKnown RBP25.69■■□□□ 1.7
CCM2-218ENST00000541586 COMTD1Q86VU5 262 aa25.69■■□□□ 1.7
CCM2-218ENST00000541586 SVOPLQ8N434 492 aa25.69■■□□□ 1.7
CCM2-218ENST00000541586 SLC2A12Q8TD20 617 aa25.69■■□□□ 1.7
CCM2-218ENST00000541586 ZNF597Q96LX8 424 aa25.69■■□□□ 1.7
CCM2-218ENST00000541586 ZNF300Q96RE9 604 aaPredicted RBP25.69■■□□□ 1.7
CCM2-218ENST00000541586 OR8D2Q9GZM6 311 aa25.69■■□□□ 1.7
CCM2-218ENST00000541586 MTHFD2LQ9H903 347 aaPredicted RBP25.69■■□□□ 1.7
CCM2-218ENST00000541586 SYNDIG1LA6NDD5 238 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 G3V2T6 193 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 DPM1O60762 260 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 STX11O75558 287 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 IFNW1P05000 195 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 ITGA2P17301 1181 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 DCTP40126 519 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 SLC37A1P57057 533 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 NPSR1Q6W5P4 371 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 OR5K1Q8NHB7 308 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 BTBD9Q96Q07 612 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 CPNE5Q9HCH3 593 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 C8orf4Q9NR00 106 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 FBXO34Q9NWN3 711 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 PRODH2Q9UF12 536 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 PEX12O00623 359 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 IGKV3-11P04433 115 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 ZNF311Q5JNZ3 666 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 OTUD3Q5T2D3 398 aaPredicted RBP25.68■■□□□ 1.7
CCM2-218ENST00000541586 FIGNL1Q6PIW4 674 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 STK32CQ86UX6 486 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 VRK2Q86Y07 508 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 HS3ST5Q8IZT8 346 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 AMER2Q8N7J2 671 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 KDF1Q8NAX2 398 aaPredicted RBP25.68■■□□□ 1.7
CCM2-218ENST00000541586 OR11G2Q8NGC1 345 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 OR14A16Q8NHC5 309 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 ADAMTS17Q8TE56 1095 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 ZNF721Q8TF20 911 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 DAZLQ92904 295 aaKnown RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms