RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 NKAIN1Q4KMZ8 207 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 HMGN2P46Q86SG4 172 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 CCDC103Q8IW40 242 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 PRSS33Q8NF86 280 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 CHPT1Q8WUD6 406 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 RASSF5Q8WWW0 418 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 TSLPQ969D9 159 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 ZNF578Q96N58 590 aaPredicted RBP8.08□□□□□ -1.12
THBS3-210ENST00000541576 TRNT1Q96Q11 434 aaKnown RBP8.08□□□□□ -1.12
THBS3-210ENST00000541576 PRRX2Q99811 253 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 CTRCQ99895 268 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 CNPPD1Q9BV87 410 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 COL25A1Q9BXS0 654 aaPredicted RBP8.08□□□□□ -1.12
THBS3-210ENST00000541576 ANKRD60Q9BZ19 345 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 PIGUQ9H490 435 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 SLC22A11Q9NSA0 550 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 CTSFQ9UBX1 484 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 SEC14L3Q9UDX4 400 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 U3KQV3 271 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 IGKV3D-11A0A0A0MRZ8 115 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 A0A0G2JPF8 293 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 NOTOA8MTQ0 251 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 HNRNPCL2B2RXH8 293 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 HNRNPCL3B7ZW38 293 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 HRKO00198 91 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 HNRNPCL4P0DMR1 293 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 CCKBRP32239 447 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 PGDP52209 483 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 VBP1P61758 197 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 DCDP81605 110 aaKnown RBP8.07□□□□□ -1.12
THBS3-210ENST00000541576 MRPS15P82914 257 aaKnown RBP8.07□□□□□ -1.12
THBS3-210ENST00000541576 RHAGQ02094 409 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 MLIPQ5VWP3 458 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 RSBN1Q5VWQ0 802 aaPredicted RBP8.07□□□□□ -1.12
THBS3-210ENST00000541576 HEPHL1Q6MZM0 1159 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 COX15Q7KZN9 410 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 BMPERQ8N8U9 685 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 C7orf57Q8NEG2 295 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 GPR32P1Q8NGA4 272 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 GEMIN6Q8WXD5 167 aaKnown RBP8.07□□□□□ -1.12
THBS3-210ENST00000541576 ZG16BQ96DA0 208 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 STACQ99469 402 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 BARD1Q99728 777 aaKnown RBP8.07□□□□□ -1.12
THBS3-210ENST00000541576 CDC6Q99741 560 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 SPATA5L1Q9BVQ7 753 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 BTBD2Q9BX70 525 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 DUSP22Q9NRW4 184 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 PNO1Q9NRX1 252 aaKnown RBP8.07□□□□□ -1.12
THBS3-210ENST00000541576 NDUFAF4Q9P032 175 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 AKAP7Q9P0M2 348 aaPredicted RBP8.07□□□□□ -1.12
THBS3-210ENST00000541576 MKL2Q9ULH7 1088 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 ERVK-19Q9WJR5 959 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 PADI2Q9Y2J8 665 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 PCDHGB3Q9Y5G1 929 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 PCNX2A6NKB5 2137 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 TRIM64CA6NLI5 447 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 A8MVJ9 347 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 C17orf105B2RV13 164 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 H0YJX3 145 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 TBX1O43435 398 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 GDF9O60383 454 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 SULT1C4O75897 302 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 CCL4P13236 92 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 PRKACGP22612 351 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 SSTR4P31391 388 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 DCTP40126 519 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 IFITM3Q01628 133 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 DUSP8Q13202 625 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 PUM1Q14671 1186 aaKnown RBP eCLIP8.07□□□□□ -1.12
THBS3-210ENST00000541576 NSDHLQ15738 373 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 EXOSC6Q5RKV6 272 aaKnown RBP8.07□□□□□ -1.12
THBS3-210ENST00000541576 OR2T5Q6IEZ7 315 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 COX18Q8N8Q8 333 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 OR2T29Q8NH02 315 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 STT3BQ8TCJ2 826 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 GPR151Q8TDV0 419 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 DACH2Q96NX9 599 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 ALPK1Q96QP1 1244 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 WFDC6Q9BQY6 131 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 TGIF2Q9GZN2 237 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 SLC38A1Q9H2H9 487 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 TP63Q9H3D4 680 aaPredicted RBP8.07□□□□□ -1.12
THBS3-210ENST00000541576 TOR3AQ9H497 397 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 CLDN25C9JDP6 229 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 DYRK3O43781 588 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 PRAMEF2O60811 474 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 LRP3O75074 770 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 CPNE3O75131 537 aaKnown RBP8.07□□□□□ -1.12
THBS3-210ENST00000541576 ZIC2O95409 532 aaPredicted RBP8.07□□□□□ -1.12
THBS3-210ENST00000541576 EMDP50402 254 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 TUBA4AP68366 448 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 E2F1Q01094 437 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 MC2RQ01718 297 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 CHRNEQ04844 493 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 FUT7Q11130 342 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 ILKQ13418 452 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 LAPTM4AQ15012 233 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 ZNHIT3Q15649 155 aaPredicted RBP8.07□□□□□ -1.12
THBS3-210ENST00000541576 MEP1AQ16819 746 aa8.07□□□□□ -1.12
THBS3-210ENST00000541576 NUP210LQ5VU65 1888 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms