RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 KNG1P01042 644 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 GYPCP04921 128 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 YES1P07947 543 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 NUDT17P0C025 328 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 IL2RGP31785 369 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 SLC1A2P43004 574 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 PPOXP50336 477 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 IDH3GP51553 393 aaPredicted RBP8.31□□□□□ -1.08
YBX3-211ENST00000541351 PNLIPRP2P54317 469 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 PHEXP78562 749 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 BASP1P80723 227 aaKnown RBP8.31□□□□□ -1.08
YBX3-211ENST00000541351 CCNIQ14094 377 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 C18orf63Q68DL7 685 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 HBMQ6B0K9 141 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 OR7E24Q6IFN5 339 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 MFSD12Q6NUT3 480 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 RBM43Q6ZSC3 357 aaKnown RBP8.31□□□□□ -1.08
YBX3-211ENST00000541351 TREML1Q86YW5 311 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 SLC43A2Q8N370 569 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 ZNF786Q8N393 782 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 TCAIMQ8N3R3 496 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 UBL4BQ8N7F7 174 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 OR2M3Q8NG83 312 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 OR4K14Q8NGD5 310 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 OR2V1Q8NHB1 315 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 TMBIM1Q969X1 311 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 CPNE4Q96A23 557 aaPredicted RBP8.31□□□□□ -1.08
YBX3-211ENST00000541351 C1GALT1C1Q96EU7 318 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 SERPINB12Q96P63 405 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 ADOQ96SZ5 270 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 KCNS3Q9BQ31 491 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 BPIFA3Q9BQP9 254 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 ITPAQ9BY32 194 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 NPAP1Q9NZP6 1156 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 FBXO5Q9UKT4 447 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 ABCG2Q9UNQ0 655 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 MMP24Q9Y5R2 645 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 EXPH5Q8NEV8 1989 aa8.31□□□□□ -1.08
YBX3-211ENST00000541351 A0A087WZY1 265 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 A0A0G2JMP0 313 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 A0A0X1KG70 313 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 CIB4A0PJX0 185 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 GOLGA6L10A6NI86 522 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 M0R1B8 84 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 FOXE1O00358 373 aaPredicted RBP8.3□□□□□ -1.08
YBX3-211ENST00000541351 CXCL13O43927 109 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 PDE5AO76074 875 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 PRKD3O94806 890 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 F7P08709 466 aaPredicted RBP8.3□□□□□ -1.08
YBX3-211ENST00000541351 MTHFD2P13995 350 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 PGCP20142 388 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 EVI2BP34910 448 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 ZNF83P51522 516 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 UBASH3AP57075 661 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 CARD18P57730 90 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 RAC1P63000 192 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 KHDRBS2Q5VWX1 349 aaKnown RBP8.3□□□□□ -1.08
YBX3-211ENST00000541351 SAXO2Q658L1 398 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 BRICD5Q6PL45 260 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 LARP4Q71RC2 724 aaKnown RBP eCLIP8.3□□□□□ -1.08
YBX3-211ENST00000541351 VN1R5Q7Z5H4 357 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 UBE3DQ7Z6J8 389 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 GGNQ86UU5 652 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 RNF214Q8ND24 703 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 OR4M2Q8NGB6 313 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 FBXO30Q8TB52 745 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 RNF128Q8TEB7 428 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 ZNF669Q96BR6 464 aaPredicted RBP8.3□□□□□ -1.08
YBX3-211ENST00000541351 BRINP2Q9C0B6 783 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 RASSF4Q9H2L5 321 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 NHEJ1Q9H9Q4 299 aaPredicted RBP8.3□□□□□ -1.08
YBX3-211ENST00000541351 ESM1Q9NQ30 184 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 KLHL9Q9P2J3 617 aa8.3□□□□□ -1.08
YBX3-211ENST00000541351 TESQ9UGI8 421 aaKnown RBP8.3□□□□□ -1.08
YBX3-211ENST00000541351 GJE1A6NN92 205 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 ESPNB1AK53 854 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 SCO2O43819 266 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 HAUS5O94927 633 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 TGFB1P01137 390 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 PORP16435 677 aaPredicted RBP8.29□□□□□ -1.08
YBX3-211ENST00000541351 GATA3P23771 443 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 SERPINF1P36955 418 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 CASP2P42575 452 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 OR3A2P47893 321 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 XKP51811 444 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 IRF8Q02556 426 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 CHRNEQ04844 493 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 MAP4K2Q12851 820 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 PPP1R3AQ16821 1122 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 ZNF362Q5T0B9 420 aaPredicted RBP8.29□□□□□ -1.08
YBX3-211ENST00000541351 DESI1Q6ICB0 168 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 MED27Q6P2C8 311 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 B3GLCTQ6Y288 498 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 ADAMTSL2Q86TH1 951 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 C1QL4Q86Z23 238 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 TUSC5Q8IXB3 177 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 ANKS4BQ8N8V4 417 aa8.29□□□□□ -1.08
YBX3-211ENST00000541351 UHMK1Q8TAS1 419 aaKnown RBP8.29□□□□□ -1.08
YBX3-211ENST00000541351 ZNF473Q8WTR7 871 aaKnown RBP8.29□□□□□ -1.08
YBX3-211ENST00000541351 WDR34Q96EX3 536 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms