RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ALPPP05187 535 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 NQO1P15559 274 aaKnown RBP8.6□□□□□ -1.03
DDX55-208ENST00000541259 ABCD3P28288 659 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 PCGF2P35227 344 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 RNF144AP50876 292 aaPredicted RBP8.6□□□□□ -1.03
DDX55-208ENST00000541259 ANXA11P50995 505 aaKnown RBP8.6□□□□□ -1.03
DDX55-208ENST00000541259 CCL11P51671 97 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 RRADP55042 308 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 TXNL4AP83876 142 aaKnown RBP8.6□□□□□ -1.03
DDX55-208ENST00000541259 RBBP4Q09028 425 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 PLCXD2Q0VAA5 305 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 TRIM25Q14258 630 aaKnown RBP8.6□□□□□ -1.03
DDX55-208ENST00000541259 DECR1Q16698 335 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 CYP27C1Q4G0S4 372 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 ZNF468Q5VIY5 522 aaPredicted RBP8.6□□□□□ -1.03
DDX55-208ENST00000541259 BROXQ5VW32 411 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 GLYATQ6IB77 296 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 TYW3Q6IPR3 259 aaKnown RBP8.6□□□□□ -1.03
DDX55-208ENST00000541259 REEP3Q6NUK4 255 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 JMJD6Q6NYC1 403 aaPredicted RBP8.6□□□□□ -1.03
DDX55-208ENST00000541259 FRRS1Q6ZNA5 592 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 LRRC69Q6ZNQ3 347 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 LRRC74BQ6ZQY2 392 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 SLC34A3Q8N130 599 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 ARHGAP24Q8N264 748 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 ARMC10Q8N2F6 343 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 C11orf65Q8NCR3 313 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 FIG4Q92562 907 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 OMA1Q96E52 524 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 TRNT1Q96Q11 434 aaKnown RBP8.6□□□□□ -1.03
DDX55-208ENST00000541259 RASL10BQ96S79 203 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 SPATA9Q9BWV2 254 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 QRSL1Q9H0R6 528 aaKnown RBP8.6□□□□□ -1.03
DDX55-208ENST00000541259 SLC38A1Q9H2H9 487 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 ZBTB20Q9HC78 741 aaPredicted RBP8.6□□□□□ -1.03
DDX55-208ENST00000541259 THUMPD1Q9NXG2 353 aaKnown RBP8.6□□□□□ -1.03
DDX55-208ENST00000541259 KCNE5Q9UJ90 142 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 LIPT1Q9Y234 373 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 PCDHGB3Q9Y5G1 929 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 KCNMB2Q9Y691 235 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 NCKAP5O14513 1909 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 MAP1BP46821 2468 aaKnown RBP8.59□□□□□ -1.03
DDX55-208ENST00000541259 A0A0G2JPF8 293 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 CENPVL1A0A0U1RR11 272 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 TMEM247A6NEH6 219 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 A6NJY4 79 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 HNRNPCL2B2RXH8 293 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 HNRNPCL3B7ZW38 293 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 K7ENP7 123 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 ACOT8O14734 319 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 ARPC2O15144 300 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 UGT2B11O75310 529 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 SOX30O94993 753 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 OR6B1O95007 311 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 PGM3O95394 542 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 IL33O95760 270 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 F10P00742 488 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 OPN1SWP03999 348 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 HNRNPCL4P0DMR1 293 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 CYP4B1P13584 511 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 GGT1P19440 569 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 ATP6V1B2P21281 511 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 SOX3P41225 446 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 CRYBA2P53672 197 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 CRISP3P54108 245 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 NRG3P56975 720 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 SOX8P57073 446 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 PCBP3P57721 371 aaKnown RBP8.59□□□□□ -1.03
DDX55-208ENST00000541259 FBXW4P57775 412 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 VEZF1Q14119 521 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 GPR68Q15743 365 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 MAPK14Q16539 360 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 FXNQ16595 210 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 MEP1AQ16819 746 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 SPATS1Q496A3 300 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 ACER2Q5QJU3 275 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 ERICH5Q6P6B1 374 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 INO80CQ6PI98 192 aaPredicted RBP8.59□□□□□ -1.03
DDX55-208ENST00000541259 IL20RBQ6UXL0 311 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 CYP2R1Q6VVX0 501 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 LINC00696Q6ZRV3 163 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 CCDC80Q76M96 950 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 PTRH1Q86Y79 214 aaKnown RBP8.59□□□□□ -1.03
DDX55-208ENST00000541259 TAGAPQ8N103 731 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 BEST3Q8N1M1 668 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 SLC5A8Q8N695 610 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 HIPK4Q8NE63 616 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 OR5M3Q8NGP4 307 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 WDR60Q8WVS4 1066 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 DIO2Q92813 273 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 ADOQ96SZ5 270 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 TREX2Q9BQ50 279 aaPredicted RBP8.59□□□□□ -1.03
DDX55-208ENST00000541259 ZNF350Q9GZX5 532 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 SAP130Q9H0E3 1048 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 MMADHCQ9H3L0 296 aaPredicted RBP8.59□□□□□ -1.03
DDX55-208ENST00000541259 ZNF552Q9H707 407 aaPredicted RBP8.59□□□□□ -1.03
DDX55-208ENST00000541259 BCL2L10Q9HD36 194 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 ANKRD10Q9NXR5 420 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 GPR83Q9NYM4 423 aa8.59□□□□□ -1.03
DDX55-208ENST00000541259 STMN3Q9NZ72 180 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms