RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 BICRALQ6AI39 1079 aa13.04□□□□□ -0.32
SCNN1A-215ENST00000540037 RPTNQ6XPR3 784 aa13.04□□□□□ -0.32
SCNN1A-215ENST00000540037 SLC43A3Q8NBI5 491 aa13.04□□□□□ -0.32
SCNN1A-215ENST00000540037 AMDHD1Q96NU7 426 aa13.04□□□□□ -0.32
SCNN1A-215ENST00000540037 C17orf62Q9BQA9 187 aa13.04□□□□□ -0.32
SCNN1A-215ENST00000540037 TRMT61BQ9BVS5 477 aaKnown RBP13.04□□□□□ -0.32
SCNN1A-215ENST00000540037 HCAR1Q9BXC0 346 aa13.04□□□□□ -0.32
SCNN1A-215ENST00000540037 C1QTNF7Q9BXJ2 289 aa13.04□□□□□ -0.32
SCNN1A-215ENST00000540037 OR51J1Q9H342 316 aa13.04□□□□□ -0.32
SCNN1A-215ENST00000540037 NUP210Q8TEM1 1887 aaPredicted RBP13.04□□□□□ -0.32
SCNN1A-215ENST00000540037 RPS10-NUDT3A0A1W2PQS6 291 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 CDC42EP2O14613 210 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 LCMT2O60294 686 aaKnown RBP13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 POP7O75817 140 aaKnown RBP13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 SOD2P04179 222 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 THY1P04216 161 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 TCRBP04435 133 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 DRD5P21918 477 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 PPP2R1BP30154 601 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 PITPNBP48739 271 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 EPHA5P54756 1037 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 BTG1P62324 171 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 TJAP1Q5JTD0 557 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 ARL9Q6T311 187 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 MRGPREQ86SM8 312 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 NRMQ8IXM6 262 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 OR13C5Q8NGS8 318 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 BBS10Q8TAM1 723 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 TMEM255BQ8WV15 326 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 ZFP3Q96NJ6 502 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 TTTY10Q9BZA0 68 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 DIABLOQ9NR28 239 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 KLHL1Q9NR64 748 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 SCML1Q9UN30 329 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 HEATR5BQ9P2D3 2071 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 DENND4CQ5VZ89 1909 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 EFCAB14O75071 495 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 ANKRD34CP0C6C1 535 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 GSTM3P21266 225 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 FRKP42685 505 aaPredicted RBP13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 CLDN2P57739 230 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 DGCR2P98153 550 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 E2F1Q01094 437 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 TSPAN31Q12999 210 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 ST3GAL2Q16842 350 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 ARHGAP15Q53QZ3 475 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 PLBD1Q6P4A8 553 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 RRM2BQ7LG56 351 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 ADGRD2Q7Z7M1 963 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 CCDC116Q8IYX3 515 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 OR4D9Q8NGE8 314 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 GNPDA2Q8TDQ7 276 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 C12orf66Q96MD2 445 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 DPH7Q9BTV6 452 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 ENKD1Q9H0I2 346 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 NLGN3Q9NZ94 848 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 AHSPQ9NZD4 102 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 MRPL15Q9P015 296 aaKnown RBP13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 TNFRSF10DQ9UBN6 386 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 ADAM30Q9UKF2 790 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 POLHQ9Y253 713 aa13.03□□□□□ -0.32
SCNN1A-215ENST00000540037 C7orf66A4D0T2 115 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 PGRMC2O15173 223 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 REM1O75628 298 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 RGS9O75916 674 aaPredicted RBP13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 DHFRP00374 187 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 MT-ND4P03905 459 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 ANXA3P12429 323 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 TALDO1P37837 337 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 MMP12P39900 470 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 CCR2P41597 374 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 CLCNKAP51800 687 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 RPL6Q02878 288 aaKnown RBP13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 SLC3A1Q07837 685 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 SNTA1Q13424 505 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 NDUFAF5Q5TEU4 345 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 PARS2Q7L3T8 475 aaKnown RBP13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 KIAA0907Q7Z7F0 614 aaPredicted RBP13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 OAFQ86UD1 273 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 LRRC28Q86X40 367 aaPredicted RBP13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 SIAH3Q8IW03 269 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 KRT78Q8N1N4 520 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 CHFRQ96EP1 664 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 SORCS2Q96PQ0 1159 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 AICDAQ9GZX7 198 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 BTBD1Q9H0C5 482 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 NT5DC2Q9H857 520 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 TM7SF3Q9NS93 570 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 HCFC1R1Q9NWW0 138 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 TMEM5Q9Y2B1 443 aa13.02□□□□□ -0.32
SCNN1A-215ENST00000540037 THSD7BQ9C0I4 1608 aa13.02□□□□□ -0.33
SCNN1A-215ENST00000540037 SLC9B1P1A6NJY1 282 aa13.02□□□□□ -0.33
SCNN1A-215ENST00000540037 KPNA3O00505 521 aaPredicted RBP13.02□□□□□ -0.33
SCNN1A-215ENST00000540037 PI15O43692 258 aa13.02□□□□□ -0.33
SCNN1A-215ENST00000540037 IGHA1P01876 353 aa13.02□□□□□ -0.33
SCNN1A-215ENST00000540037 MRPL3P09001 348 aaKnown RBP13.02□□□□□ -0.33
SCNN1A-215ENST00000540037 HOXB3P14651 431 aaPredicted RBP13.02□□□□□ -0.33
SCNN1A-215ENST00000540037 TYRP14679 529 aa13.02□□□□□ -0.33
SCNN1A-215ENST00000540037 PTBP1P26599 531 aaKnown RBP eCLIP13.02□□□□□ -0.33
SCNN1A-215ENST00000540037 ACADLP28330 430 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms