RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ENPP2Q13822 863 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 UNC5DQ6UXZ4 953 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 B3GLCTQ6Y288 498 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 PTRH1Q86Y79 214 aaKnown RBP9.4□□□□□ -0.9
TRAF1-202ENST00000540010 OR52P1PQ8NH57 321 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 ASB15Q8WXK1 588 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 SNAPC3Q92966 411 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 S100A16Q96FQ6 103 aaKnown RBP9.4□□□□□ -0.9
TRAF1-202ENST00000540010 SLC6A16Q9GZN6 736 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 B3GNT3Q9Y2A9 372 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 MAB21L2Q9Y586 359 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 KCNE1BA0A087WTH5 132 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 LOC102723532A0A0G2JNH3 316 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 OR2AT4A6NND4 320 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 LRRN3E7EW58 273 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 H3BQ06 376 aaPredicted RBP9.4□□□□□ -0.9
TRAF1-202ENST00000540010 PRAMEF4O60810 478 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF823P16415 610 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 TYRP1P17643 537 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 LIPAP38571 399 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 TNFRSF4P43489 277 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 TAP2Q03519 686 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 PRAMEF17Q5VTA0 474 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 PRAMEF9Q5VWM5 478 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 KIAA1211LQ6NV74 962 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 DUS1LQ6P1R4 473 aaKnown RBP9.4□□□□□ -0.9
TRAF1-202ENST00000540010 KLHL24Q6TFL4 600 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 PAMR1Q6UXH9 720 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 CPOQ8IVL8 374 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 VWA5B2Q8N398 1253 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 SLC44A3Q8N4M1 653 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 ZNF615Q8N8J6 731 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 ANKK1Q8NFD2 765 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 HSPA12BQ96MM6 686 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 OR5M11Q96RB7 305 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 BCL7BQ9BQE9 202 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 MKRN2Q9H000 416 aaKnown RBP9.4□□□□□ -0.9
TRAF1-202ENST00000540010 LRRN3Q9H3W5 708 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 EXO5Q9H790 373 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 SIAEQ9HAT2 523 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 NUDT15Q9NV35 164 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 SLC23A2Q9UGH3 650 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 CDH10Q9Y6N8 788 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 H0YIV9 168 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 CD22P20273 847 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 UQCRC1P31930 480 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 ZFP36L2P47974 494 aaKnown RBP9.4□□□□□ -0.9
TRAF1-202ENST00000540010 WNT4P56705 351 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 FCRLBQ6BAA4 426 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 FAAH2Q6GMR7 532 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 SLCO4C1Q6ZQN7 724 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 WDR53Q7Z5U6 358 aaPredicted RBP9.4□□□□□ -0.9
TRAF1-202ENST00000540010 BEST4Q8NFU0 473 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 OR2T35Q8NGX2 323 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 CPPED1Q9BRF8 314 aaPredicted RBP9.4□□□□□ -0.9
TRAF1-202ENST00000540010 RNF167Q9H6Y7 350 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 SLC52A3Q9NQ40 469 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 ASIC5Q9NY37 505 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 NUP50Q9UKX7 468 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 PCDHGB1Q9Y5G3 927 aa9.4□□□□□ -0.9
TRAF1-202ENST00000540010 GBF1Q92538 1859 aa9.4□□□□□ -0.91
TRAF1-202ENST00000540010 KHNYNO15037 678 aaKnown RBP9.4□□□□□ -0.91
TRAF1-202ENST00000540010 TACSTD2P09758 323 aa9.4□□□□□ -0.91
TRAF1-202ENST00000540010 POLR2CP19387 275 aaPredicted RBP9.4□□□□□ -0.91
TRAF1-202ENST00000540010 ISL1P61371 349 aa9.4□□□□□ -0.91
TRAF1-202ENST00000540010 SIM1P81133 766 aaPredicted RBP9.4□□□□□ -0.91
TRAF1-202ENST00000540010 NDUFAF5Q5TEU4 345 aa9.4□□□□□ -0.91
TRAF1-202ENST00000540010 NOXA1Q86UR1 476 aa9.4□□□□□ -0.91
TRAF1-202ENST00000540010 ALDH16A1Q8IZ83 802 aa9.4□□□□□ -0.91
TRAF1-202ENST00000540010 FANK1Q8TC84 345 aa9.4□□□□□ -0.91
TRAF1-202ENST00000540010 CASTOR1Q8WTX7 329 aa9.4□□□□□ -0.91
TRAF1-202ENST00000540010 COQ8BQ96D53 544 aa9.4□□□□□ -0.91
TRAF1-202ENST00000540010 CCDC115Q96NT0 180 aa9.4□□□□□ -0.91
TRAF1-202ENST00000540010 GTPBP2Q9BX10 602 aaKnown RBP9.4□□□□□ -0.91
TRAF1-202ENST00000540010 ZDHHC5Q9C0B5 715 aa9.4□□□□□ -0.91
TRAF1-202ENST00000540010 RANGRFQ9HD47 186 aaPredicted RBP9.4□□□□□ -0.91
TRAF1-202ENST00000540010 UGT2A1Q9Y4X1 527 aa9.4□□□□□ -0.91
TRAF1-202ENST00000540010 KNTC1P50748 2209 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 PAPLNO95428 1278 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 ADORA3P0DMS8 318 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 NPPBP16860 134 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 NDUFV2P19404 249 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 CTHP32929 405 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 KIAA0040Q15053 153 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 SF3B4Q15427 424 aaKnown RBP eCLIP9.39□□□□□ -0.91
TRAF1-202ENST00000540010 TBCEQ15813 527 aaPredicted RBP9.39□□□□□ -0.91
TRAF1-202ENST00000540010 OR5J2Q8NH18 312 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 PHOSPHO1Q8TCT1 267 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 PCNPQ8WW12 178 aaKnown RBP9.39□□□□□ -0.91
TRAF1-202ENST00000540010 MROQ9BYG7 248 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 ZNF576Q9H609 170 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 SRA1Q9HD15 236 aaKnown RBP9.39□□□□□ -0.91
TRAF1-202ENST00000540010 MGAT4AQ9UM21 535 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 YARS2Q9Y2Z4 477 aaKnown RBP9.39□□□□□ -0.91
TRAF1-202ENST00000540010 NOP16Q9Y3C1 178 aaKnown RBP9.39□□□□□ -0.91
TRAF1-202ENST00000540010 LAMA3Q16787 3333 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 TRBV2A0A0J9YWF9 115 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 A0A0X1KG70 313 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 C13orf42A0A1B0GVH6 325 aa9.39□□□□□ -0.91
TRAF1-202ENST00000540010 ARHGAP33O14559 1287 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms