RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 IGFBP1P08833 259 aaPredicted RBP13.76□□□□□ -0.21
ATL3-203ENST00000538786 DHPSP49366 369 aaPredicted RBP13.76□□□□□ -0.21
ATL3-203ENST00000538786 SEPHS1P49903 392 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 SNRPGP62308 76 aaKnown RBP13.76□□□□□ -0.21
ATL3-203ENST00000538786 LSM11P83369 360 aaKnown RBP eCLIP13.76□□□□□ -0.21
ATL3-203ENST00000538786 HOXC5Q00444 222 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 PSG6Q00889 435 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 BNC1Q01954 994 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 DECR1Q16698 335 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 ZNF730Q6ZMV8 503 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 CCDC81Q6ZN84 652 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 RANBP3LQ86VV4 465 aaPredicted RBP13.76□□□□□ -0.21
ATL3-203ENST00000538786 GNPDA2Q8TDQ7 276 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 TRUB1Q8WWH5 349 aaKnown RBP13.76□□□□□ -0.21
ATL3-203ENST00000538786 FUNDC2Q9BWH2 189 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 POLR2J2Q9GZM3 115 aaKnown RBP13.76□□□□□ -0.21
ATL3-203ENST00000538786 ARMC7Q9H6L4 198 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 AMBNQ9NP70 447 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 C11orf16Q9NQ32 467 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 CLN6Q9NWW5 311 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 HEMK1Q9Y5R4 338 aaPredicted RBP13.76□□□□□ -0.21
ATL3-203ENST00000538786 CCDC88CQ9P219 2028 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 CDHR4A6H8M9 788 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 TMEM150CB9EJG8 249 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 PEX12O00623 359 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 PRAMEF2O60811 474 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 KCNK2O95069 426 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 CDK1P06493 297 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 TNNI3P19429 210 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 MAOAP21397 527 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 CSF2RBP32927 897 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 GALNSP34059 522 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 ZNF136P52737 540 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 NUDT6P53370 316 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 BIKQ13323 160 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 SERTAD2Q14140 314 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 CWF19L1Q69YN2 538 aaKnown RBP13.76□□□□□ -0.21
ATL3-203ENST00000538786 WDR74Q6RFH5 385 aaPredicted RBP13.76□□□□□ -0.21
ATL3-203ENST00000538786 CASP12Q6UXS9 341 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 GDF7Q7Z4P5 450 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 WDR5BQ86VZ2 330 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 D2HGDHQ8N465 521 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 Q8N9G6 341 aaPredicted RBP13.76□□□□□ -0.21
ATL3-203ENST00000538786 ACOT11Q8WXI4 607 aaPredicted RBP13.76□□□□□ -0.21
ATL3-203ENST00000538786 FCGR1BQ92637 280 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 MVB12AQ96EY5 273 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 SLC41A3Q96GZ6 507 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 VSTM2LQ96N03 204 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 GPA33Q99795 319 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 PELOQ9BRX2 385 aaKnown RBP13.76□□□□□ -0.21
ATL3-203ENST00000538786 GPN2Q9H9Y4 310 aaPredicted RBP13.76□□□□□ -0.21
ATL3-203ENST00000538786 SLC24A3Q9HC58 644 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 EML5Q05BV3 1969 aa13.76□□□□□ -0.21
ATL3-203ENST00000538786 CEP192Q8TEP8 1941 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 SPAG17Q6Q759 2223 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 HRKO00198 91 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 CCNA2P20248 432 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 SSTR4P31391 388 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 DYNC1I2Q13409 638 aaKnown RBP13.75□□□□□ -0.21
ATL3-203ENST00000538786 ZNF267Q14586 743 aaPredicted RBP13.75□□□□□ -0.21
ATL3-203ENST00000538786 MRPL2Q5T653 305 aaKnown RBP13.75□□□□□ -0.21
ATL3-203ENST00000538786 PMS2CLQ68D20 193 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 MED25Q71SY5 747 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 RRM2BQ7LG56 351 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 PRSS42Q7Z5A4 293 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 KMT5CQ86Y97 462 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 PIGXQ8TBF5 258 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 SLC41A2Q96JW4 573 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 Q96MT0 163 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 EVA1AQ9H8M9 152 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 CAPN10Q9HC96 672 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 GPR83Q9NYM4 423 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 NLGN3Q9NZ94 848 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 ENPP5Q9UJA9 477 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 NTNG1Q9Y2I2 539 aa13.75□□□□□ -0.21
ATL3-203ENST00000538786 OR2W5A6NFC9 320 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 THY1P04216 161 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 MSL3P1P0C860 447 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 MYF5P13349 255 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 TDGF1P13385 188 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 OMPP47874 163 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 GIPRP48546 466 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 ST13P50502 369 aaKnown RBP13.74□□□□□ -0.21
ATL3-203ENST00000538786 FUT7Q11130 342 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 TSPAN31Q12999 210 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 TBCEQ15813 527 aaPredicted RBP13.74□□□□□ -0.21
ATL3-203ENST00000538786 FLYWCH1Q4VC44 716 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 TMEM201Q5SNT2 666 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 SNAP47Q5SQN1 464 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 UBE2UQ5VVX9 321 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 SLC16A12Q6ZSM3 486 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 TTLL10Q6ZVT0 673 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 PRICKLE2Q7Z3G6 844 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 ANKRD13BQ86YJ7 626 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 OR8J1Q8NGP2 316 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 DCUN1D5Q9BTE7 237 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 TIMMDC1Q9NPL8 285 aa13.74□□□□□ -0.21
ATL3-203ENST00000538786 PRMT8Q9NR22 394 aaPredicted RBP13.74□□□□□ -0.21
ATL3-203ENST00000538786 CNOT2Q9NZN8 540 aaKnown RBP13.74□□□□□ -0.21
ATL3-203ENST00000538786 GMEB2Q9UKD1 530 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms