RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 VANGL1Q8TAA9 524 aaPredicted RBP18.03■□□□□ 0.48
EFCAB11-202ENST00000538485 POLE3Q9NRF9 147 aa18.03■□□□□ 0.48
EFCAB11-202ENST00000538485 RLIMQ9NVW2 624 aa18.03■□□□□ 0.48
EFCAB11-202ENST00000538485 IFT52Q9Y366 437 aa18.03■□□□□ 0.48
EFCAB11-202ENST00000538485 MAGED1Q9Y5V3 778 aaPredicted RBP18.03■□□□□ 0.48
EFCAB11-202ENST00000538485 HS3ST3B1Q9Y662 390 aa18.03■□□□□ 0.48
EFCAB11-202ENST00000538485 CDC14CA4D256 554 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 FRG2CA6NGY1 282 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 OR6C76A6NM76 312 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 J3KTA2 159 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 M0R3H8 397 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 PRKAR1BP31321 381 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 AQP4P55087 323 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 NRF1Q16656 503 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 FLYWCH1Q4VC44 716 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 SLC29A4Q7RTT9 530 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 TMEM179BQ7Z7N9 219 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 CLIP4Q8N3C7 705 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 GALNT4Q8N4A0 578 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 CBR4Q8N4T8 237 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 CATSPER1Q8NEC5 780 aa18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 ZNF443Q9Y2A4 671 aaPredicted RBP18.02■□□□□ 0.48
EFCAB11-202ENST00000538485 PTPRBP23467 1997 aa18.02■□□□□ 0.47
EFCAB11-202ENST00000538485 GUSBP08236 651 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 ITGA2P17301 1181 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 ATP6V1C1P21283 382 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 FOLR3P41439 243 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 DCAF7P61962 342 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 RPS18P62269 152 aaKnown RBP18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 RNF4P78317 190 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 TBPL2Q6SJ96 375 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 HS3ST5Q8IZT8 346 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 ESX1Q8N693 406 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 PMM1Q92871 262 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 ZNF184Q99676 751 aaPredicted RBP18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 G6PC3Q9BUM1 346 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 LIN28AQ9H9Z2 209 aaKnown RBP18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 TCFL5Q9UL49 500 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 ZNF232Q9UNY5 417 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 ENPP4Q9Y6X5 453 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 SYT5O00445 386 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 DBIP07108 87 aaKnown RBP18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 THBS1P07996 1170 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 CD63P08962 238 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 RAB40ALP0C0E4 278 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 NR0B1P51843 470 aaKnown RBP18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 SLC26A5P58743 744 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 GABREP78334 506 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 LARS2Q15031 903 aaKnown RBP18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 PCOLCEQ15113 449 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 HLA-DQA1Q5Y7H0 255 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 TCTN3Q6NUS6 607 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 DHRS4L2Q6PKH6 230 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 HSDL2Q6YN16 418 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 ZNF836Q6ZNA1 936 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 ZNF441Q8N8Z8 693 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 OR6T1Q8NGN1 323 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 EFHD2Q96C19 240 aaPredicted RBP18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 VMP1Q96GC9 406 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 C9orf16Q9BUW7 83 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 POLR1BQ9H9Y6 1135 aa18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 CNOT11Q9UKZ1 510 aaKnown RBP18.01■□□□□ 0.47
EFCAB11-202ENST00000538485 G3V2T6 193 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 FRS3O43559 492 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 DPM1O60762 260 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 E2F6O75461 281 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 NID1P14543 1247 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 FUT4P22083 530 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 MMP11P24347 488 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 RRM2P31350 389 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 DCTP40126 519 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 RNF144AP50876 292 aaPredicted RBP18■□□□□ 0.47
EFCAB11-202ENST00000538485 EEF1A1P68104 462 aaKnown RBP18■□□□□ 0.47
EFCAB11-202ENST00000538485 DECR1Q16698 335 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 CPEB4Q17RY0 729 aaKnown RBP eCLIP18■□□□□ 0.47
EFCAB11-202ENST00000538485 PPP4R4Q6NUP7 873 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 ZDHHC13Q8IUH4 622 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 NLGN4XQ8N0W4 816 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 NLGN4YQ8NFZ3 816 aaPredicted RBP18■□□□□ 0.47
EFCAB11-202ENST00000538485 ADAMTS14Q8WXS8 1223 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 ZNF347Q96SE7 839 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 TRIM45Q9H8W5 580 aaPredicted RBP18■□□□□ 0.47
EFCAB11-202ENST00000538485 FARSAQ9Y285 508 aaKnown RBP18■□□□□ 0.47
EFCAB11-202ENST00000538485 SLC9A8Q9Y2E8 581 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 TESMINQ9Y4I5 508 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 LRRC42Q9Y546 428 aa18■□□□□ 0.47
EFCAB11-202ENST00000538485 IGHV1-45A0A0A0MS14 117 aa17.99■□□□□ 0.47
EFCAB11-202ENST00000538485 NPIPB9F8W1W9 429 aa17.99■□□□□ 0.47
EFCAB11-202ENST00000538485 EI24O14681 340 aa17.99■□□□□ 0.47
EFCAB11-202ENST00000538485 FFAR1O14842 300 aa17.99■□□□□ 0.47
EFCAB11-202ENST00000538485 SLC30A4O14863 429 aa17.99■□□□□ 0.47
EFCAB11-202ENST00000538485 DNAJB5O75953 348 aa17.99■□□□□ 0.47
EFCAB11-202ENST00000538485 COX6A1P12074 109 aa17.99■□□□□ 0.47
EFCAB11-202ENST00000538485 RHCEP18577 417 aa17.99■□□□□ 0.47
EFCAB11-202ENST00000538485 OTUD3Q5T2D3 398 aaPredicted RBP17.99■□□□□ 0.47
EFCAB11-202ENST00000538485 PDZK1Q5T2W1 519 aa17.99■□□□□ 0.47
EFCAB11-202ENST00000538485 KIRREL2Q6UWL6 708 aa17.99■□□□□ 0.47
EFCAB11-202ENST00000538485 DEF8Q6ZN54 512 aa17.99■□□□□ 0.47
EFCAB11-202ENST00000538485 PRR22Q8IZ63 422 aa17.99■□□□□ 0.47
EFCAB11-202ENST00000538485 C17orf47Q8NEP4 570 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms