RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 VIPR1P32241 457 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 CHRNA4P43681 627 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 RENBPP51606 427 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 CLDN8P56748 225 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 ACY1Q03154 408 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SNTB2Q13425 540 aaKnown RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 RFTN2Q52LD8 501 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 LBHQ53QV2 105 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 LRIF1Q5T3J3 769 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 GCNT6Q5T4J0 391 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 RNLSQ5VYX0 342 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 TCEAL8Q8IYN2 117 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 LINC01465Q8N7H1 131 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SYT14Q8NB59 555 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 DMBX1Q8NFW5 382 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 OR5M3Q8NGP4 307 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 VRK1Q99986 396 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 CLMPQ9H6B4 373 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 LRTM1Q9HBL6 345 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 AKAP7Q9P0M2 348 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 CFAP97Q9P2B7 532 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SLC25A13Q9UJS0 675 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 CA14Q9ULX7 337 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 ASB1Q9Y576 335 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SLC9B1P1A6NJY1 282 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 PIRO00625 290 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 IMPA2O14732 288 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 S100A2P29034 98 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SYTL3Q4VX76 610 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 ANKRD46Q86W74 232 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 ZNF561Q8N587 486 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SPICQ8N5J4 248 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 CLEC4CQ8WTT0 213 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 NUDT8Q8WV74 236 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 TSGA13Q96PP4 275 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 CDK15Q96Q40 435 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 CACYBPQ9HB71 228 aaKnown RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 ISYNA1Q9NPH2 558 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SNX11Q9Y5W9 270 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 TRDV1A0A1B0GX56 115 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 HMSDA8MTL9 139 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 A8MVJ9 347 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 PTGESO14684 152 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 PRMT3O60678 531 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SC5DO75845 299 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 ACTR1BP42025 376 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 AGTR2P50052 363 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 RBP2P50120 134 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 CDH4P55283 916 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 RHOAP61586 193 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SNRPGP62308 76 aaKnown RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 HEPACAMQ14CZ8 416 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 RNASE12Q5GAN4 147 aaKnown RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 KRTCAP2Q8N6L1 136 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 PEX11GQ96HA9 241 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 FCRL2Q96LA5 508 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 MAP3K3Q99759 626 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 OCSTAMPQ9BR26 566 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 WDR26Q9H7D7 661 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 TDP1Q9NUW8 608 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 METTL1Q9UBP6 276 aaKnown RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 NEUROG3Q9Y4Z2 214 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 TMEM218A2RU14 115 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 LRIT2A6NDA9 550 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 YJEFN3A6XGL0 299 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 MCIDASD6RGH6 385 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 PPM1DO15297 605 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 CREBL2O60519 120 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 HTR6P50406 440 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 DAOAP59103 153 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 KIAA0040Q15053 153 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 TEAD2Q15562 447 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 USF2Q15853 346 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 IFI44LQ53G44 452 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 CLEC20AQ6ZU45 233 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SLC43A2Q8N370 569 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SAMD12Q8N8I0 201 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 OR10H5Q8NGA6 315 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SLC39A7Q92504 469 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 HS6ST2Q96MM7 605 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 DOHHQ9BU89 302 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SARGQ9BW04 601 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 CPEB1Q9BZB8 566 aaKnown RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 C20orf85Q9H1P6 137 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 GKN1Q9NS71 199 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 ZNF629Q9UEG4 869 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 C5orf52A6NGY3 159 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 H3BN98 237 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 CLIC1O00299 241 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 KHDRBS3O75525 346 aaKnown RBP10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 HIST1H2ABP04908 130 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 DRD5P21918 477 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 MAPK3P27361 379 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 FGF9P31371 208 aaPredicted RBP10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 CCR6P51684 374 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 IL10RBQ08334 325 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 H3F3CQ6NXT2 135 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 ZNF621Q6ZSS3 439 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 TPGS1Q6ZTW0 290 aa10.23□□□□□ -0.77
CLSTN3-207ENST00000537408 HIST3H2AQ7L7L0 130 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms