RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 DSN1Q9H410 356 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 GLIPR2Q9H4G4 154 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 C1orf109Q9NX04 203 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 PLEKHA6Q9Y2H5 1048 aa11.88□□□□□ -0.51
RTN3-207ENST00000536011 KIAA1549Q9HCM3 1950 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 ABCA4P78363 2273 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 A0A1W2PNV4 684 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 SH3D21A4FU49 640 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 SMIM23A6NLE4 172 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 NPIPB8E9PQR5 432 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 MSTNO14793 375 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 FADS1O60427 444 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 NME6O75414 186 aaPredicted RBP11.87□□□□□ -0.51
RTN3-207ENST00000536011 FCGR2AP12318 317 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 KRT4P19013 534 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 HK1P19367 917 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 TCEA1P23193 301 aaKnown RBP11.87□□□□□ -0.51
RTN3-207ENST00000536011 CPOXP36551 454 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 PCYT1AP49585 367 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 RPS3AP61247 264 aaKnown RBP11.87□□□□□ -0.51
RTN3-207ENST00000536011 STX5Q13190 355 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 GLYR1Q49A26 553 aaPredicted RBP11.87□□□□□ -0.51
RTN3-207ENST00000536011 RNF165Q6ZSG1 346 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 UBQLNLQ8IYU4 475 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 CEP70Q8NHQ1 597 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 LINC01560Q8TB33 94 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 SMPDL3BQ92485 455 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 GFM2Q969S9 779 aaKnown RBP11.87□□□□□ -0.51
RTN3-207ENST00000536011 TRIM44Q96DX7 344 aaPredicted RBP11.87□□□□□ -0.51
RTN3-207ENST00000536011 ZBED6CLQ96FA7 236 aaPredicted RBP11.87□□□□□ -0.51
RTN3-207ENST00000536011 LMF2Q9BU23 707 aaKnown RBP11.87□□□□□ -0.51
RTN3-207ENST00000536011 G6PC3Q9BUM1 346 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 TMUB1Q9BVT8 246 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 LRTM1Q9HBL6 345 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 EIF3LQ9Y262 564 aaKnown RBP11.87□□□□□ -0.51
RTN3-207ENST00000536011 TMED5Q9Y3A6 229 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 ZNF175Q9Y473 711 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 VPS13CQ709C8 3753 aa11.87□□□□□ -0.51
RTN3-207ENST00000536011 MED12Q93074 2177 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 ZNF469Q96JG9 3925 aaPredicted RBP11.86□□□□□ -0.51
RTN3-207ENST00000536011 A8MXE2 369 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 AZIN1O14977 448 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 TNFRSF21O75509 655 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 SMNDC1O75940 238 aaKnown RBP eCLIP11.86□□□□□ -0.51
RTN3-207ENST00000536011 PRPS2P11908 318 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 RFX3P48380 749 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 B3GALT5-AS1P59052 145 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 OCRLQ01968 901 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 C17orf67Q0P5P2 114 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 HSPB3Q12988 150 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 SH2D5Q6ZV89 423 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 GSPT2Q8IYD1 628 aaKnown RBP11.86□□□□□ -0.51
RTN3-207ENST00000536011 CNEP1R1Q8N9A8 125 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 CDRT4Q8N9R6 151 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 PPCDCQ96CD2 204 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 C1GALT1C1Q96EU7 318 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 SLC39A3Q9BRY0 314 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 LIME1Q9H400 295 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 REEP4Q9H6H4 257 aa11.86□□□□□ -0.51
RTN3-207ENST00000536011 UQCRHLA0A096LP55 91 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 TBX19O60806 448 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 TNFSF13O75888 250 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 UTS2O95399 124 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 TGM6O95932 706 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 SHBGP04278 402 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 KLK2P20151 261 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 GABRA3P34903 492 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 ASMTP46597 345 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 MANFP55145 182 aaKnown RBP11.85□□□□□ -0.51
RTN3-207ENST00000536011 PRR5P85299 388 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 CLEC6AQ6EIG7 209 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 SZRD1Q7Z422 152 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 R3HCC1LQ7Z5L2 792 aaKnown RBP11.85□□□□□ -0.51
RTN3-207ENST00000536011 GPR151Q8TDV0 419 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 DUSP19Q8WTR2 217 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 MTERF3Q96E29 417 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 MS4A4EQ96PG1 132 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 EML4Q9HC35 981 aaKnown RBP11.85□□□□□ -0.51
RTN3-207ENST00000536011 EQTNQ9NQ60 294 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 ACSS1Q9NUB1 689 aaPredicted RBP11.85□□□□□ -0.51
RTN3-207ENST00000536011 MKS1Q9NXB0 559 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 PAQR5Q9NXK6 330 aaPredicted RBP11.85□□□□□ -0.51
RTN3-207ENST00000536011 ZNF226Q9NYT6 803 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 MED11Q9P086 117 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 CCL27Q9Y4X3 112 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 AP4B1Q9Y6B7 739 aa11.85□□□□□ -0.51
RTN3-207ENST00000536011 NIPBLQ6KC79 2804 aaeCLIP11.84□□□□□ -0.51
RTN3-207ENST00000536011 MPDZO75970 2070 aa11.84□□□□□ -0.51
RTN3-207ENST00000536011 A0A087WZY1 265 aa11.84□□□□□ -0.51
RTN3-207ENST00000536011 IGLV3-32A0A0A0MS00 114 aa11.84□□□□□ -0.51
RTN3-207ENST00000536011 OR2M5A3KFT3 312 aa11.84□□□□□ -0.51
RTN3-207ENST00000536011 TMEM114B3SHH9 223 aa11.84□□□□□ -0.51
RTN3-207ENST00000536011 H3BML4 177 aa11.84□□□□□ -0.51
RTN3-207ENST00000536011 SEC14L5O43304 696 aa11.84□□□□□ -0.51
RTN3-207ENST00000536011 TRIM13O60858 407 aa11.84□□□□□ -0.51
RTN3-207ENST00000536011 ATE1O95260 518 aa11.84□□□□□ -0.51
RTN3-207ENST00000536011 HSPA4LO95757 839 aa11.84□□□□□ -0.51
RTN3-207ENST00000536011 ANGPTL1O95841 491 aa11.84□□□□□ -0.51
RTN3-207ENST00000536011 HRGP04196 525 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms