RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 SEC23BQ15437 767 aa7.44□□□□□ -1.22
COL21A1-212ENST00000535941 TTC23Q5W5X9 447 aa7.44□□□□□ -1.22
COL21A1-212ENST00000535941 TNFAIP8L2Q6P589 184 aaPredicted RBP7.44□□□□□ -1.22
COL21A1-212ENST00000535941 PLEKHG7Q6ZR37 379 aa7.44□□□□□ -1.22
COL21A1-212ENST00000535941 TMEM151BQ8IW70 566 aa7.44□□□□□ -1.22
COL21A1-212ENST00000535941 OFCC1Q8IZS5 231 aa7.44□□□□□ -1.22
COL21A1-212ENST00000535941 LSM14AQ8ND56 463 aaKnown RBP7.44□□□□□ -1.22
COL21A1-212ENST00000535941 TOR1AIP2Q8NFQ8 470 aa7.44□□□□□ -1.22
COL21A1-212ENST00000535941 ZDHHC12Q96GR4 267 aa7.44□□□□□ -1.22
COL21A1-212ENST00000535941 DEPDC7Q96QD5 511 aa7.44□□□□□ -1.22
COL21A1-212ENST00000535941 C3orf18Q9UK00 162 aa7.44□□□□□ -1.22
COL21A1-212ENST00000535941 BAG5Q9UL15 447 aa7.44□□□□□ -1.22
COL21A1-212ENST00000535941 PSME2Q9UL46 239 aa7.44□□□□□ -1.22
COL21A1-212ENST00000535941 TMCC3Q9ULS5 477 aa7.44□□□□□ -1.22
COL21A1-212ENST00000535941 ZAR1LA6NP61 321 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 ARHGAP33O14559 1287 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 RGS13O14921 159 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 BRINP1O60477 761 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 ALX3O95076 343 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 NADKO95544 446 aaPredicted RBP7.43□□□□□ -1.22
COL21A1-212ENST00000535941 AK1P00568 194 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 IGKV3-11P04433 115 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 FEN1P39748 380 aaKnown RBP7.43□□□□□ -1.22
COL21A1-212ENST00000535941 PDX1P52945 283 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 CRISP3P54108 245 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 PSG6Q00889 435 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 TUBA3CQ13748 450 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 DUSP5Q16690 384 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 TMEM201Q5SNT2 666 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 LINC00114Q6XXX2 140 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 C1orf210Q8IVY1 113 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 LILRB2Q8N423 598 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 ZNF441Q8N8Z8 693 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 TRIM63Q969Q1 353 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 PRRC1Q96M27 445 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 SDF2Q99470 211 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 SPOCK3Q9BQ16 436 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 ZNF426Q9BUY5 554 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 DUSP23Q9BVJ7 150 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 DUSP21Q9H596 190 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 RLIMQ9NVW2 624 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 COQ3Q9NZJ6 369 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 CALML5Q9NZT1 146 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 LRIT1Q9P2V4 623 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 HYKKA2RU49 373 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 AGAP5A6NIR3 686 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 SGK494L7N484 410 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 MITFO75030 526 aaPredicted RBP7.43□□□□□ -1.22
COL21A1-212ENST00000535941 RDH16O75452 317 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 CCNKO75909 580 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 OPN1SWP03999 348 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 CYC1P08574 325 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 CCDC159P0C7I6 412 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 TNFRSF1BP20333 461 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 SOAT1P35610 550 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 POLR2IP36954 125 aaKnown RBP7.43□□□□□ -1.22
COL21A1-212ENST00000535941 SLC15A1P46059 708 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 ANXA11P50995 505 aaKnown RBP7.43□□□□□ -1.22
COL21A1-212ENST00000535941 CASP9P55211 416 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 P2RX3P56373 397 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 HSD11B2P80365 405 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 SHC2P98077 582 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 CHRNEQ04844 493 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 ZNF141Q15928 474 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 EXOC3L2Q2M3D2 409 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 TRMT12Q53H54 448 aaKnown RBP7.43□□□□□ -1.22
COL21A1-212ENST00000535941 PLA2G2CQ5R387 149 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 C12orf73Q69YU5 71 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 GATAD2AQ86YP4 633 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 CCDC103Q8IW40 242 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 CCDC28AQ8IWP9 274 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 LSMEM1Q8N8F7 131 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 OR9A4Q8NGU2 314 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 ZCCHC10Q8TBK6 192 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 SH3YL1Q96HL8 342 aaPredicted RBP7.43□□□□□ -1.22
COL21A1-212ENST00000535941 BBS4Q96RK4 519 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 ZNF607Q96SK3 696 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 DPYSL5Q9BPU6 564 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 TUBA1CQ9BQE3 449 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 SOX17Q9H6I2 414 aaPredicted RBP7.43□□□□□ -1.22
COL21A1-212ENST00000535941 C3orf14Q9HBI5 128 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 MMACHCQ9Y4U1 282 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 PCDHGB2Q9Y5G2 931 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 SYNDIG1LA6NDD5 238 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 FAM227AF5H4B4 570 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 TYRP1P17643 537 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 IGFBP5P24593 272 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 PTGS2P35354 604 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 GGT2P36268 569 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 PRIM2P49643 509 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 OR1D5P58170 312 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 SIM1P81133 766 aaPredicted RBP7.43□□□□□ -1.22
COL21A1-212ENST00000535941 TCEA2Q15560 299 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 COLEC12Q5KU26 742 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 ENTPD8Q5MY95 495 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 C1orf94Q6P1W5 598 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 NPSR1Q6W5P4 371 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 THAP5Q7Z6K1 395 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 CDRT4Q8N9R6 151 aa7.43□□□□□ -1.22
COL21A1-212ENST00000535941 SLC16A11Q8NCK7 471 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms