RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 LIPT1Q9Y234 373 aa16.99■□□□□ 0.31
HTATSF1-204ENST00000535601 TMEM150CB9EJG8 249 aa16.99■□□□□ 0.31
HTATSF1-204ENST00000535601 IFNA16P05015 189 aa16.99■□□□□ 0.31
HTATSF1-204ENST00000535601 LIPAP38571 399 aa16.99■□□□□ 0.31
HTATSF1-204ENST00000535601 C1orf189Q5VU69 101 aa16.99■□□□□ 0.31
HTATSF1-204ENST00000535601 RNF167Q9H6Y7 350 aa16.99■□□□□ 0.31
HTATSF1-204ENST00000535601 ATXN7L1Q9ULK2 861 aaPredicted RBP16.99■□□□□ 0.31
HTATSF1-204ENST00000535601 GNB5O14775 395 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 ASNA1O43681 348 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 TLX2O43763 284 aaPredicted RBP16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 PRKYO43930 277 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 IGKV1D-16P01601 117 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 CSF2RBP32927 897 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 ENTPD1P49961 510 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 PLAURQ03405 335 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 ARHGAP11BQ3KRB8 267 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 KLHL35Q6PF15 583 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 PRR23CQ6ZRP0 262 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 NRMQ8IXM6 262 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 PEX5LQ8IYB4 626 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 STX19Q8N4C7 294 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 OR8D4Q8NGM9 314 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 DIO2Q92813 273 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 RIT1Q92963 219 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 TCTN2Q96GX1 697 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 RBM18Q96H35 190 aaKnown RBP16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 ERVK-19Q9WJR5 959 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 DUXAA6NLW8 204 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 CLCA1A8K7I4 914 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 ADAM11O75078 769 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 CKMT1AP12532 417 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 GABRA4P48169 554 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 TMED1Q13445 227 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 FAM53BQ14153 422 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 GINS1Q14691 196 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 SHISA6Q6ZSJ9 500 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 GRHL3Q8TE85 626 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 ARHGDIGQ99819 225 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 TUBA1CQ9BQE3 449 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 PIGUQ9H490 435 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 MGAT4BQ9UQ53 548 aa16.98■□□□□ 0.31
HTATSF1-204ENST00000535601 TECTAO75443 2155 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 HTR2AP28223 471 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 NUDT1P36639 197 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 CXCR4P61073 352 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 CTF1Q16619 201 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 WDR88Q6ZMY6 472 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 GDF7Q7Z4P5 450 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 RBM12BQ8IXT5 1001 aaKnown RBP16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 OR51Q1Q8NH59 317 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 DOK1Q99704 481 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 NUDT22Q9BRQ3 303 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 PDE7BQ9NP56 450 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 NECTIN3Q9NQS3 549 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 NTMQ9P121 344 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 CLDN16Q9Y5I7 305 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 HRO43593 1189 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 PLOD3O60568 738 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 RNH1P13489 461 aaKnown RBP16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 S1PR1P21453 382 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 AFF3P51826 1226 aaKnown RBP16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 PSG6Q00889 435 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 PDZK1Q5T2W1 519 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 PAQR6Q6TCH4 344 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 PRSS48Q7RTY5 328 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 PTCHD1Q96NR3 888 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 OR5M11Q96RB7 305 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 MESP1Q9BRJ9 268 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 SYNDIG1Q9H7V2 258 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 MTHFD2LQ9H903 347 aaPredicted RBP16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 PRTFDC1Q9NRG1 225 aa16.97■□□□□ 0.31
HTATSF1-204ENST00000535601 AGAP5A6NIR3 686 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 AP3D1O14617 1153 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 BNC1Q01954 994 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 MINDY4Q4G0A6 757 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 DESI1Q6ICB0 168 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 SHFQ7M4L6 423 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 RCBTB1Q8NDN9 531 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 TSLPQ969D9 159 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 CLEC2DQ9UHP7 191 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 FOLR1P15328 257 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 EMDP50402 254 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 ZNF136P52737 540 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 SLC30A6Q6NXT4 461 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 TMPRSS9Q7Z410 1059 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 SAMD14Q8IZD0 417 aaPredicted RBP16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 PFN4Q8NHR9 129 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 ZNF420Q8TAQ5 688 aaPredicted RBP16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 SLC41A3Q96GZ6 507 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 ZNF350Q9GZX5 532 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 ATP13A2Q9NQ11 1180 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 PCNX3Q9H6A9 2034 aa16.96■□□□□ 0.31
HTATSF1-204ENST00000535601 IGHV1OR21-1A0A087WYE8 117 aa16.96■□□□□ 0.3
HTATSF1-204ENST00000535601 GMFGO60234 142 aa16.96■□□□□ 0.3
HTATSF1-204ENST00000535601 STX11O75558 287 aa16.96■□□□□ 0.3
HTATSF1-204ENST00000535601 GIMD1P0DJR0 217 aa16.96■□□□□ 0.3
HTATSF1-204ENST00000535601 GNSP15586 552 aa16.96■□□□□ 0.3
HTATSF1-204ENST00000535601 CD1CP29017 333 aa16.96■□□□□ 0.3
HTATSF1-204ENST00000535601 TTKP33981 857 aa16.96■□□□□ 0.3
HTATSF1-204ENST00000535601 GRK5P34947 590 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms