RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 TNFRSF4P43489 277 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 RELAQ04206 551 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 NEIL3Q8TAT5 605 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 NPLQ9BXD5 320 aaPredicted RBP16.25■□□□□ 0.19
PHRF1-206ENST00000534320 PINK1Q9BXM7 581 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 PTGES2Q9H7Z7 377 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 F5H0A9 414 aaPredicted RBP16.25■□□□□ 0.19
PHRF1-206ENST00000534320 PET100P0DJ07 73 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 TUBG1P23258 451 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 CASRP41180 1078 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 ACTC1P68032 377 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 ACTA1P68133 377 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 RPE65Q16518 533 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 ADAMTSL4Q6UY14 1074 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 IQCF1Q8N6M8 205 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 VN1R2Q8NFZ6 395 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 FKBP10Q96AY3 582 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 POLE4Q9NR33 117 aa16.25■□□□□ 0.19
PHRF1-206ENST00000534320 THAP10Q9P2Z0 257 aaPredicted RBP16.25■□□□□ 0.19
PHRF1-206ENST00000534320 HSD11B1P28845 292 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 SPATC1Q76KD6 591 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 ZNF440Q8IYI8 595 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 TMEM102Q8N9M5 508 aaPredicted RBP16.24■□□□□ 0.19
PHRF1-206ENST00000534320 FOLH1BQ9HBA9 442 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 SCP2D1Q9UJQ7 156 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 PLEKHA6Q9Y2H5 1048 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 CDH10Q9Y6N8 788 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 SLC22A31A6NKX4 558 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 LRRN3E7EW58 273 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 CASC3O15234 703 aaKnown RBP16.24■□□□□ 0.19
PHRF1-206ENST00000534320 ARFRP1Q13795 201 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 SGCBQ16585 318 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 PLEKHG7Q6ZR37 379 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 SNX29P2Q8IUI4 249 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 LILRA3Q8N6C8 439 aaPredicted RBP16.24■□□□□ 0.19
PHRF1-206ENST00000534320 LRRN3Q9H3W5 708 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 SPATA6Q9NWH7 488 aaPredicted RBP16.24■□□□□ 0.19
PHRF1-206ENST00000534320 SUSD2Q9UGT4 822 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 PCDHGA8Q9Y5G5 932 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 C11orf98E9PRG8 122 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 NR2C1P13056 603 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 MAPK3P27361 379 aaPredicted RBP16.24■□□□□ 0.19
PHRF1-206ENST00000534320 MTNR1AP48039 350 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 ALG10BQ5I7T1 473 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 HENMT1Q5T8I9 393 aaKnown RBP16.24■□□□□ 0.19
PHRF1-206ENST00000534320 ALKBH2Q6NS38 261 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 TMED4Q7Z7H5 227 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 PAPD5Q8NDF8 572 aaKnown RBP16.24■□□□□ 0.19
PHRF1-206ENST00000534320 OR6N2Q8NGY6 317 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 INTS6Q9UL03 887 aaKnown RBP16.24■□□□□ 0.19
PHRF1-206ENST00000534320 ZFR2Q9UPR6 939 aaKnown RBP16.24■□□□□ 0.19
PHRF1-206ENST00000534320 LRRC37AA6NMS7 1700 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 PTGER1P34995 402 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 ODF4Q2M2E3 257 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 XKR7Q5GH72 579 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 SLC44A3Q8N4M1 653 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 POGLUT1Q8NBL1 392 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 LYSMD1Q96S90 227 aa16.24■□□□□ 0.19
PHRF1-206ENST00000534320 BORCS7-ASMTA0A0B4J1R7 106 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 GXYLT2A0PJZ3 443 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 C7orf72A4D263 438 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 PRAMEF2O60811 474 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 CSN2P05814 226 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 PFN3P60673 137 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 RASGEF1BQ0VAM2 473 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 ACBD7Q8N6N7 88 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 RBP7Q96R05 134 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 ARL6Q9H0F7 186 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 HOXC11O43248 304 aaPredicted RBP16.23■□□□□ 0.19
PHRF1-206ENST00000534320 F3P13726 295 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 AHRP35869 848 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 MRPS21P82921 87 aaKnown RBP16.23■□□□□ 0.19
PHRF1-206ENST00000534320 PUS10Q3MIT2 529 aaKnown RBP16.23■□□□□ 0.19
PHRF1-206ENST00000534320 TMEM52BQ4KMG9 183 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 BCL7AQ4VC05 210 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 ARHGAP11AQ6P4F7 1023 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 FOXRED2Q8IWF2 684 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 NSMAFQ92636 917 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 CMKLR1Q99788 373 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 CA5BQ9Y2D0 317 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 NUMBLQ9Y6R0 609 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 FLRT2O43155 660 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 B4GAT1O43505 415 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 PTTG1O95997 202 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 NAA10P41227 235 aaPredicted RBP16.23■□□□□ 0.19
PHRF1-206ENST00000534320 DUSP3P51452 185 aaPredicted RBP16.23■□□□□ 0.19
PHRF1-206ENST00000534320 NCS1P62166 190 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 SEC23BQ15437 767 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 TMEM240Q5SV17 173 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 S100A16Q96FQ6 103 aaKnown RBP16.23■□□□□ 0.19
PHRF1-206ENST00000534320 B3GNT4Q9C0J1 378 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 GPR52Q9Y2T5 361 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 RDH16O75452 317 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 C22orf42Q6IC83 251 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 DEDD2Q8WXF8 326 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 MR1Q95460 341 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 ZNF486Q96H40 463 aaPredicted RBP16.23■□□□□ 0.19
PHRF1-206ENST00000534320 TEX37Q96LM6 180 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 HHIPQ96QV1 700 aa16.23■□□□□ 0.19
PHRF1-206ENST00000534320 BEX2Q9BXY8 128 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms