RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 PEX1O43933 1283 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 TPST1O60507 370 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 TIPRLO75663 272 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 NKX2-2O95096 273 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 H6PDO95479 791 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 CST1P01037 141 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 CAPNS1P04632 268 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 IFNW1P05000 195 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 C1QTNF9P0C862 333 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 GABRA3P34903 492 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 PTGER1P34995 402 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 HSPA13P48723 471 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 EXOSC7Q15024 291 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 SYPL1Q16563 259 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 GRAMD1BQ3KR37 738 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 DCST2Q5T1A1 773 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 ENPP6Q6UWR7 440 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 C1orf229Q6ZS94 237 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 ZDHHC21Q8IVQ6 265 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 CHDHQ8NE62 594 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 C17orf47Q8NEP4 570 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 SLC2A12Q8TD20 617 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 PTPMT1Q8WUK0 201 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 CDS1Q92903 461 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 SLCO4A1Q96BD0 722 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 C16orf58Q96GQ5 468 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 VSTM2LQ96N03 204 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 COL21A1Q96P44 957 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 C9orf16Q9BUW7 83 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 KLHL4Q9C0H6 718 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 SERHL2Q9H4I8 314 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 SOX17Q9H6I2 414 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 RUBCNLQ9H714 662 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 FOLH1BQ9HBA9 442 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 RIMS3Q9UJD0 308 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 CLDN16Q9Y5I7 305 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 GPC6Q9Y625 555 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 ASPMQ8IZT6 3477 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 TGFBR3LH3BV60 316 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 SYT5O00445 386 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 E2F6O75461 281 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 RECKO95980 971 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 THBS1P07996 1170 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 CT62P0C5K7 136 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 LIFP15018 202 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 LCN1P31025 176 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 PRKAR1BP31321 381 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 SSTR4P31391 388 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 TRHRP34981 398 aaPredicted RBP10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 KRT20P35900 424 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 EIF2S3P41091 472 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 MAGEA2P43356 314 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 EMDP50402 254 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 SSPNQ14714 243 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 DUSP5Q16690 384 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 DECR1Q16698 335 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 CYP27C1Q4G0S4 372 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 LRRC69Q6ZNQ3 347 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 SHISA6Q6ZSJ9 500 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 PIWIL3Q7Z3Z3 882 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 ZDHHC13Q8IUH4 622 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 SVOPLQ8N434 492 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 PACRGLQ8N7B6 248 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 ANKFN1Q8N957 763 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 KDF1Q8NAX2 398 aaPredicted RBP10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 OR1N1Q8NGS0 311 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 C16orf52Q8NHV5 167 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 EDARADDQ8WWZ3 215 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 LRTOMTQ8WZ04 291 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 NR4A3Q92570 626 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 HOXB13Q92826 284 aaPredicted RBP10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 TSLPQ969D9 159 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 TAMM41Q96BW9 452 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 SLC35A4Q96G79 324 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 ZNF354BQ96LW1 612 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 BTBD9Q96Q07 612 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 CCNL2Q96S94 520 aaPredicted RBP10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 PKP2Q99959 881 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 PINK1Q9BXM7 581 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 ZNF350Q9GZX5 532 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 CNOT11Q9UKZ1 510 aaKnown RBP10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 APC2O95996 2303 aa10.13□□□□□ -0.79
CCDC90B-218ENST00000533761 FRYQ5TBA9 3013 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 MYOCOSA0A1B0GUC4 107 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 C2orf92A0A1B0GVN3 265 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 SAGE2PA6NJ88 616 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 GNB5O14775 395 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 ACOX3O15254 700 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 DPM1O60762 260 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 CNOT3O75175 753 aaKnown RBP10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 MFN2O95140 757 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 C1QCP02747 245 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 DBIP07108 87 aaKnown RBP10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 ACP2P11117 423 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 IL7RP16871 459 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 S1PR1P21453 382 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 F8A1P23610 371 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 PPICP45877 212 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 NRG3P56975 720 aa10.12□□□□□ -0.79
CCDC90B-218ENST00000533761 SLC37A1P57057 533 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms