RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 PRKCDQ05655 676 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 MAD2L1BPQ15013 274 aaPredicted RBP5.1□□□□□ -1.59
CKAP5-212ENST00000533413 LTB4RQ15722 352 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 SMN1Q16637 294 aaKnown RBP5.1□□□□□ -1.59
CKAP5-212ENST00000533413 PRSS36Q5K4E3 855 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 CPZQ66K79 652 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 SLC25A25Q6KCM7 469 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 CAPN13Q6MZZ7 669 aaPredicted RBP5.1□□□□□ -1.59
CKAP5-212ENST00000533413 FBXL22Q6P050 247 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 USP53Q70EK8 1073 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 CHST9Q7L1S5 443 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 ERASQ7Z444 233 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 FAM185AQ8N0U4 392 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 POMGNT2Q8NAT1 580 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 FBLIM1Q8WUP2 373 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 RLN3Q8WXF3 142 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 AKAP1Q92667 903 aaKnown RBP eCLIP5.1□□□□□ -1.59
CKAP5-212ENST00000533413 DTD2Q96FN9 168 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 WBP1Q96G27 269 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 KLHL15Q96M94 604 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 NECAB3Q96P71 396 aaPredicted RBP5.1□□□□□ -1.59
CKAP5-212ENST00000533413 COPS4Q9BT78 406 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 GPR87Q9BY21 358 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 PPA2Q9H2U2 334 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 IKZF5Q9H5V7 419 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 REEP1Q9H902 201 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 MAT2BQ9NZL9 334 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 OPTCQ9UBM4 332 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 ASB1Q9Y576 335 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 PEX16Q9Y5Y5 336 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 COL4A2P08572 1712 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 OR2A25A4D2G3 310 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 METTL15A6NJ78 407 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 ANHXE9PGG2 379 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 ANKRD28O15084 1053 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 CCL16O15467 120 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 OR1I1O60431 355 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 PRAMEF11O60813 436 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 ESR1P03372 595 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 LCATP04180 440 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 RPLP0P05388 317 aaKnown RBP5.1□□□□□ -1.59
CKAP5-212ENST00000533413 FABP3P05413 133 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 LPLP06858 475 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 IL7P13232 177 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 ITGALP20701 1170 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 ERP29P30040 261 aaKnown RBP5.1□□□□□ -1.59
CKAP5-212ENST00000533413 CD6P30203 668 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 GRK5P34947 590 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 PGFP49763 221 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 DAPP51397 102 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 ZNF140P52738 457 aaPredicted RBP5.1□□□□□ -1.59
CKAP5-212ENST00000533413 ABHD18Q0P651 414 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 ABRQ12979 859 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 HYAL4Q2M3T9 481 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 HNRNPA1L2Q32P51 320 aaKnown RBP5.1□□□□□ -1.59
CKAP5-212ENST00000533413 RAET1GQ6H3X3 334 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 BRAT1Q6PJG6 821 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 CIR1Q86X95 450 aaPredicted RBP5.1□□□□□ -1.59
CKAP5-212ENST00000533413 STK40Q8N2I9 435 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 GPR137CQ8N3F9 429 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 MEIOBQ8N635 442 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 KRTCAP2Q8N6L1 136 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 CD200R1Q8TD46 325 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 SETD7Q8WTS6 366 aaKnown RBP5.1□□□□□ -1.59
CKAP5-212ENST00000533413 ZDHHC1Q8WTX9 485 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 KCNJ9Q92806 393 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 SNAPC3Q92966 411 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 YIPF5Q969M3 257 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 IGSF8Q969P0 613 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 TADA1Q96BN2 335 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 COA4Q9NYJ1 87 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 ZNF490Q9ULM2 529 aaPredicted RBP5.1□□□□□ -1.59
CKAP5-212ENST00000533413 TRAPPC4Q9Y296 219 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 BTBD3Q9Y2F9 522 aa5.1□□□□□ -1.59
CKAP5-212ENST00000533413 NOTCH4Q99466 2003 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 A0A096LPI6 279 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 LOC110117498-PIK3R3F6TDL0 507 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 LGALS8O00214 317 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 WWP2O00308 870 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 OR7A17O14581 309 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 WNT9AO14904 365 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 KLK10O43240 276 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 TRIM3O75382 744 aaPredicted RBP5.09□□□□□ -1.59
CKAP5-212ENST00000533413 HTR3BO95264 441 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 RHOP08100 348 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 NQO2P16083 231 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 CBLP22681 906 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 MAOBP27338 520 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 TGFBR1P36897 503 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 PSMB10P40306 273 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 KIR3DL2P43630 455 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 OR2B6P58173 313 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.09□□□□□ -1.59
CKAP5-212ENST00000533413 SCN1BQ07699 218 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 SNTB1Q13884 538 aaKnown RBP5.09□□□□□ -1.59
CKAP5-212ENST00000533413 ZNF273Q14593 569 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 KIAA0040Q15053 153 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 SGCBQ16585 318 aa5.09□□□□□ -1.59
CKAP5-212ENST00000533413 C18orf21Q32NC0 220 aaPredicted RBP5.09□□□□□ -1.59
CKAP5-212ENST00000533413 PROX2Q3B8N5 592 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms