RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 MGME1Q9BQP7 344 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 DPH7Q9BTV6 452 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 HTATIP2Q9BUP3 242 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 FUNDC2Q9BWH2 189 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 SEMA4CQ9C0C4 833 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 RAB33BQ9H082 229 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 CSTL1Q9H114 145 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 ING2Q9H160 280 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 ELOVL6Q9H5J4 265 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 TUBA4BQ9H853 241 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 RNF121Q9H920 327 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 TPT1P8Q9HAU6 139 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 POPDC2Q9HBU9 364 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 ZDHHC4Q9NPG8 344 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 IL1RAPQ9NPH3 570 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 ASAH2Q9NR71 780 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 SIRT7Q9NRC8 400 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 SLC17A7Q9P2U7 560 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 AASSQ9UDR5 926 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 GABRQQ9UN88 632 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 PSG11Q9UQ72 335 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 RNF6Q9Y252 685 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 ADAM18Q9Y3Q7 739 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 LYVE1Q9Y5Y7 322 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 KIAA1551Q9HCM1 1747 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 ANKRD36CQ5JPF3 1778 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 ADGRB1O14514 1584 aa5.16□□□□□ -1.58
CD44-236ENST00000533222 RIMBP3CA6NJZ7 1639 aa5.15□□□□□ -1.58
CD44-236ENST00000533222 RIMBP3BA6NNM3 1639 aa5.15□□□□□ -1.58
CD44-236ENST00000533222 LRP5O75197 1615 aa5.15□□□□□ -1.58
CD44-236ENST00000533222 RAPGEF6Q8TEU7 1601 aa5.15□□□□□ -1.58
CD44-236ENST00000533222 MTCL1Q9Y4B5 1905 aaKnown RBP5.15□□□□□ -1.58
CD44-236ENST00000533222 TRPM2O94759 1503 aa5.15□□□□□ -1.58
CD44-236ENST00000533222 ATP6AP2A0A1C7CYW4 349 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 GSAPA4D1B5 854 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 TBC1D3BA6NDS4 549 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 FABP12A6NFH5 140 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 SDR42E2A6NKP2 422 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 A6NLC8 198 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 WASHC1A8K0Z3 465 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 C1orf196B1AJZ1 125 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 WASH3PC4AMC7 463 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 E9PLN8 166 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 PRRG2O14669 202 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 TP53I11O14683 189 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 SLC16A3O15427 465 aaKnown RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 MED7O43513 233 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 RGS10O43665 173 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 LCMT2O60294 686 aaKnown RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 DOK2O60496 412 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 SCN2BO60939 215 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 SLCO2B1O94956 709 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 PAPSS2O95340 614 aaPredicted RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 MOCS2O96007 188 aaPredicted RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 HLA-DQB1P01920 261 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 LIPFP07098 398 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 ELANEP08246 267 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 F7P08709 466 aaPredicted RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 UBA1P22314 1058 aaKnown RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 ADRA1DP25100 572 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 MGAT1P26572 445 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 MAS1LP35410 378 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 NAA10P41227 235 aaPredicted RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 KCNJ3P48549 501 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 CDC34P49427 236 aaPredicted RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 KLF3P57682 345 aaPredicted RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 EEFSECP57772 596 aaKnown RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 RRAS2P62070 204 aaPredicted RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 HSD11B2P80365 405 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 DHODHQ02127 395 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 NHLH1Q02575 133 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 SCN1BQ07699 218 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 C17orf67Q0P5P2 114 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 NME3Q13232 169 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 SCGB2A2Q13296 93 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 GPR17Q13304 367 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 INPP5JQ15735 1006 aaPredicted RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 GPR68Q15743 365 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 C5orf64Q2M2E5 130 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 PIGGQ5H8A4 983 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 RABL3Q5HYI8 236 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 SPANXN2Q5MJ10 180 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 FBXO47Q5MNV8 452 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 TPRG1LQ5T0D9 272 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 C10orf91Q5T1B1 145 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 SYT6Q5T7P8 510 aaPredicted RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 PIP5KL1Q5T9C9 394 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 FAXCQ5TGI0 409 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 LCN1P1Q5VSP4 162 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 MEDAGQ5VYS4 303 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 TBC1D3GQ6DHY5 549 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 LPCAT3Q6P1A2 487 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 MOXD1Q6UVY6 613 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 WASH2PQ6VEQ5 465 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 MBOAT1Q6ZNC8 495 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 LRRC55Q6ZSA7 311 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 CHST15Q7LFX5 561 aaPredicted RBP5.15□□□□□ -1.59
CD44-236ENST00000533222 ADIPOR2Q86V24 386 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 COMMD2Q86X83 199 aa5.15□□□□□ -1.59
CD44-236ENST00000533222 VRK3Q8IV63 474 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms