RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 TCAIMQ8N3R3 496 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 TCEANCQ8N8B7 351 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 GATSQ8NAP1 163 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 ICA1LQ8NDH6 482 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 OLIG1Q8TAK6 271 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 LKAAEAR1Q8TD35 194 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 ZNRF4Q8WWF5 429 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 NUS1Q96E22 293 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 NEDD4LQ96PU5 975 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 MTMR9Q96QG7 549 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 KRTAP3-1Q9BYR8 98 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 CXXC4Q9H2H0 198 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 GPN2Q9H9Y4 310 aaPredicted RBP3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 C2orf42Q9NWW7 574 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 DUS2Q9NX74 493 aaKnown RBP3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 CHMP5Q9NZZ3 219 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 CIDEBQ9UHD4 219 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 CSDC2Q9Y534 153 aaKnown RBP3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 PTGDR2Q9Y5Y4 395 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 PEX16Q9Y5Y5 336 aa3.79□□□□□ -1.8
AC055878.1-201ENST00000531858 RPAP1Q9BWH6 1393 aaPredicted RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 GRIN2DO15399 1336 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 IGLV9-49A0A0B4J1Y8 123 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 A0A1B0GUH1 482 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 A0A1W2PPV4 95 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 ASPDHA6ND91 283 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 CD8B2A6NJW9 211 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 C1QTNF3-AMACRE9PGA6 284 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 CYB561D2O14569 222 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 EI24O14681 340 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 FPGTO14772 594 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 NARSO43776 548 aaKnown RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 RAMP1O60894 148 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 STX11O75558 287 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 POP4O95707 220 aaKnown RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 PAK4O96013 591 aaPredicted RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 ERCC1P07992 297 aaPredicted RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 CDH1P12830 882 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 GIFP27352 417 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 RORAP35398 523 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 RPS5P46782 204 aaKnown RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 P2RY1P47900 373 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 DUSP3P51452 185 aaPredicted RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 NOVA1P51513 510 aaKnown RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 CLDN18P56856 261 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 YWHAEP62258 255 aaKnown RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 EWSR1Q01844 656 aaKnown RBP eCLIP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 RIPPLY1Q0D2K3 151 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 DLG1Q12959 904 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 NFATC4Q14934 902 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 TEX44Q53QW1 395 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 BEX5Q5H9J7 111 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 SPANXN4Q5MJ08 99 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 IRAK1BP1Q5VVH5 260 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 MLIPQ5VWP3 458 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 CLEC6AQ6EIG7 209 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 C6orf89Q6UWU4 347 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 OLFML1Q6UWY5 402 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 Q6ZPA2 131 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 TRIM69Q86WT6 500 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 ERO1BQ86YB8 467 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 TBC1D10CQ8IV04 446 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 DND1Q8IYX4 353 aaKnown RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 KIRREL3Q8IZU9 778 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 DNAJC22Q8N4W6 341 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 PQLC3Q8N755 202 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 SLC16A11Q8NCK7 471 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 OR2L3Q8NG85 312 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 OR5T2Q8NGG2 359 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 OR5M9Q8NGP3 310 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 OR6F1Q8NGZ6 308 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 OR1L3Q8NH93 324 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 DTX3LQ8TDB6 740 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 LRRC15Q8TF66 581 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 ARNTL2Q8WYA1 636 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 RAB1CQ92928 201 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 ARL5BQ96KC2 179 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 IL4I1Q96RQ9 567 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 NKX3-1Q99801 234 aaPredicted RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 TMEM175Q9BSA9 504 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 DPH7Q9BTV6 452 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 ST6GALNAC5Q9BVH7 336 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 SF3B5Q9BWJ5 86 aaKnown RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 DUSP16Q9BY84 665 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 RBM38Q9H0Z9 239 aaKnown RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 RHOJQ9H4E5 214 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 ELOVL6Q9H5J4 265 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 RANBP3Q9H6Z4 567 aaPredicted RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 EBF2Q9HAK2 575 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 SLC25A19Q9HC21 320 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 LYARQ9NX58 379 aaKnown RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 POMT2Q9UKY4 750 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 VANGL2Q9ULK5 521 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 EXOSC1Q9Y3B2 195 aaKnown RBP3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 TIMM10BQ9Y5J6 103 aa3.78□□□□□ -1.8
AC055878.1-201ENST00000531858 FRMPD4Q14CM0 1322 aa3.77□□□□□ -1.81
AC055878.1-201ENST00000531858 A0A087X1B8 175 aa3.77□□□□□ -1.81
AC055878.1-201ENST00000531858 IQCMA0A1B0GVH7 501 aa3.77□□□□□ -1.81
AC055878.1-201ENST00000531858 GSTTP1A0A1W2PQM5 241 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms