RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	C2orf78	A6NCI8	922 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	HLA-DMA	P28067	261 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	STK19	P49842	368 aa	Predicted RBP	7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	HSD11B2	P80365	405 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	AAK1	Q2M2I8	961 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	C1orf220	Q5T0J3	134 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	DCST2	Q5T1A1	773 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	AGAP7P	Q5VUJ5	663 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	PAPD4	Q6PIY7	484 aa	Known RBP	7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	ZNF546	Q86UE3	836 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	ZFP82	Q8N141	532 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	ECHDC3	Q96DC8	303 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	DCAF13	Q9NV06	445 aa	Known RBP	7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	TAS2R16	Q9NYV7	291 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	CRYBG1	Q9Y4K1	1723 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	WNT6	Q9Y6F9	365 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	B3GALNT1	O75752	331 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	PDGFA	P04085	211 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	GYPB	P06028	91 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	RHO	P08100	348 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	CHAT	P28329	748 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	SELENOW	P63302	87 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	HOXC5	Q00444	222 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	KCNC3	Q14003	757 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	ARHGAP11A	Q6P4F7	1023 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	SVBP	Q8N300	66 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	SLC41A3	Q96GZ6	507 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	SUSD3	Q96L08	255 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	ZNF416	Q9BWM5	594 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	XYLT2	Q9H1B5	865 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	VRTN	Q9H8Y1	702 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	FNIP2	Q9P278	1114 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	EMCN	Q9ULC0	261 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	RCE1	Q9Y256	329 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	STYXL1	Q9Y6J8	313 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	MYH7	P12883	1935 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	CACNG3	O60359	315 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	TPPP	O94811	219 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	SCGB1D1	O95968	90 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	RAB4A	P20338	218 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	ZNF41	P51814	821 aa	Predicted RBP	7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	ZNF33A	Q06730	810 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	OPCML	Q14982	345 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	ACSM3	Q53FZ2	586 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	OR2G6	Q5TZ20	316 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	LYPD4	Q6UWN0	246 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986		Q6ZNX1	250 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	OR52N2	Q8NGI0	321 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	HAS2	Q92819	552 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	SLC35B4	Q969S0	331 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	ACTL8	Q9H568	366 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	DDX31	Q9H8H2	851 aa	Known RBP	7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	OSGIN1	Q9UJX0	560 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	RNF215	Q9Y6U7	377 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	TIAM2	Q8IVF5	1701 aa		7.23	□□□□□ -1.25
CTNND1-223	ENST00000529986	MYH7B	A7E2Y1	1941 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	TP53	P04637	393 aa	Predicted RBP	7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	GAA	P10253	952 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	MSR1	P21757	451 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	GCA	P28676	217 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	PPT1	P50897	306 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	RAB5C	P51148	216 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	SELPLG	Q14242	412 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	EIF4H	Q15056	248 aa	Known RBP	7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	C11orf91	Q3C1V1	193 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	PRRT3	Q5FWE3	981 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	ARHGAP40	Q5TG30	622 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	RPL13AP3	Q6NVV1	102 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	APOOL	Q6UXV4	268 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	C12orf45	Q8N5I9	185 aa	Predicted RBP	7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	MUL1	Q969V5	352 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	TCEAL7	Q9BRU2	100 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	GALNT9	Q9HCQ5	603 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	ACKR4	Q9NPB9	350 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	GNG13	Q9P2W3	67 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	ATG4B	Q9Y4P1	393 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	ASB4	Q9Y574	426 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	NUP98	P52948	1817 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	FAM183A	A6NL82	134 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	RFXAP	O00287	272 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	OR7A17	O14581	309 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	MED6	O75586	246 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	UBB	P0CG47	229 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	UBC	P0CG48	685 aa	Known RBP	7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	ZNF30	P17039	623 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	GABRB3	P28472	473 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	ERVFC1	P60507	584 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	RSU1	Q15404	277 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	VASN	Q6EMK4	673 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	MEX3B	Q6ZN04	569 aa	Known RBP	7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	RNF111	Q6ZNA4	994 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	GDPGP1	Q6ZNW5	385 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	SLC35F2	Q8IXU6	374 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	ENTHD1	Q8IYW4	607 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	ZNF454	Q8N9F8	522 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	SIMC1	Q8NDZ2	872 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	IL17RD	Q8NFM7	739 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	C16orf78	Q8WTQ4	265 aa		7.22	□□□□□ -1.25
CTNND1-223	ENST00000529986	SDSL	Q96GA7	329 aa		7.22	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms