RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SEL1L2Q5TEA6 688 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 CENPPQ6IPU0 288 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 ZNF774Q6NX45 483 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 PNCKQ6P2M8 343 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 TSEN54Q7Z6J9 526 aaKnown RBP3.61□□□□□ -1.83
C11orf88-204ENST00000529661 ZDHHC21Q8IVQ6 265 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 ARL14Q8N4G2 192 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 FNDC8Q8TC99 324 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 C11orf24Q96F05 449 aaPredicted RBP3.61□□□□□ -1.83
C11orf88-204ENST00000529661 HPDLQ96IR7 371 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 ELMO2Q96JJ3 720 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 C4orf36Q96KX1 117 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 TBC1D10AQ9BXI6 508 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 RAB33BQ9H082 229 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 COMMD4Q9H0A8 199 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 ADNPQ9H2P0 1102 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 POLD4Q9HCU8 107 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 TM9SF3Q9HD45 589 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 AMBNQ9NP70 447 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 SLC7A10Q9NS82 523 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 FARSBQ9NSD9 589 aaKnown RBP3.61□□□□□ -1.83
C11orf88-204ENST00000529661 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.61□□□□□ -1.83
C11orf88-204ENST00000529661 RBM28Q9NW13 759 aaKnown RBP3.61□□□□□ -1.83
C11orf88-204ENST00000529661 C1orf123Q9NWV4 160 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 RDH8Q9NYR8 311 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 RAI14Q9P0K7 980 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 RCOR3Q9P2K3 495 aaPredicted RBP3.61□□□□□ -1.83
C11orf88-204ENST00000529661 RNF24Q9Y225 148 aa3.61□□□□□ -1.83
C11orf88-204ENST00000529661 SF3B1O75533 1304 aaKnown RBP eCLIP3.61□□□□□ -1.83
C11orf88-204ENST00000529661 IGHV3OR16-12A0A075B7B8 117 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 TRBV7-9A0A0J9YWB2 115 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 LRRC30A6NM36 301 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 C11orf98E9PRG8 122 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 KLHL41O60662 606 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 RAMP1O60894 148 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 RENP00797 406 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 WNT2P09544 360 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 OTX2P32243 289 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 DLSTP36957 453 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 ARHGDIAP52565 204 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 METAP1P53582 386 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 RPS6P62753 249 aaKnown RBP3.6□□□□□ -1.83
C11orf88-204ENST00000529661 CNTN2Q02246 1040 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 CHIT1Q13231 466 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 CYLC2Q14093 348 aaPredicted RBP3.6□□□□□ -1.83
C11orf88-204ENST00000529661 ZIC1Q15915 447 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 SLC36A3Q495N2 470 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 C14orf28Q4W4Y0 310 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 CYS1Q717R9 158 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 UNC5CLQ8IV45 518 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 C17orf47Q8NEP4 570 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 CRYGNQ8WXF5 182 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 RASL10AQ92737 203 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 TUBGCP3Q96CW5 907 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 RAB3CQ96E17 227 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 FEM1AQ9BSK4 669 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 RPP25Q9BUL9 199 aaKnown RBP3.6□□□□□ -1.83
C11orf88-204ENST00000529661 NCOR1P1Q9H4R4 102 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 RMND5AQ9H871 391 aa3.6□□□□□ -1.83
C11orf88-204ENST00000529661 NAP1L2Q9ULW6 460 aaPredicted RBP3.6□□□□□ -1.83
C11orf88-204ENST00000529661 CLDN5O00501 218 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 CASQ2O14958 399 aaPredicted RBP3.59□□□□□ -1.83
C11orf88-204ENST00000529661 TBX19O60806 448 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 UFL1O94874 794 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 OPN1LWP04000 364 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 CSF2P04141 144 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 CLUP10909 449 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 XRCC1P18887 633 aaPredicted RBP3.59□□□□□ -1.83
C11orf88-204ENST00000529661 HNRNPA2B1P22626 353 aaKnown RBP3.59□□□□□ -1.83
C11orf88-204ENST00000529661 IGFBP5P24593 272 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 PSMA5P28066 241 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 EMDP50402 254 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 TMED1Q13445 227 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 GPM6BQ13491 265 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 UBE2V2Q15819 145 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 USH1GQ495M9 461 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 LRRC23Q53EV4 343 aaPredicted RBP3.59□□□□□ -1.83
C11orf88-204ENST00000529661 BOLA3Q53S33 107 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 MS4A13Q5J8X5 152 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 NHLRC3Q5JS37 347 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 SEL1L3Q68CR1 1132 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 STAC2Q6ZMT1 411 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 PRSS48Q7RTY5 328 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 TIPARPQ7Z3E1 657 aaKnown RBP3.59□□□□□ -1.83
C11orf88-204ENST00000529661 CDC20BQ86Y33 519 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 FGFRL1Q8N441 504 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 FAM133AQ8N9E0 248 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 OR52M1Q8NGK5 317 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 UPRTQ96BW1 309 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 C9orf85Q96MD7 179 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 SLC25A51Q9H1U9 297 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 DHX33Q9H6R0 707 aaKnown RBP3.59□□□□□ -1.83
C11orf88-204ENST00000529661 BARX2Q9UMQ3 279 aaPredicted RBP3.59□□□□□ -1.83
C11orf88-204ENST00000529661 GMPPBQ9Y5P6 360 aa3.59□□□□□ -1.83
C11orf88-204ENST00000529661 DDX49Q9Y6V7 483 aaKnown RBP3.59□□□□□ -1.83
C11orf88-204ENST00000529661 ATP10DQ9P241 1426 aa3.59□□□□□ -1.84
C11orf88-204ENST00000529661 ESYT2A0FGR8 921 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 ZSCAN5CA6NGD5 496 aaPredicted RBP3.58□□□□□ -1.84
C11orf88-204ENST00000529661 SHISA9B4DS77 424 aa3.58□□□□□ -1.84
C11orf88-204ENST00000529661 SGK1O00141 431 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms