RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 CYP51A1Q16850 503 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 SPATS1Q496A3 300 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 GPAT3Q53EU6 434 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 SLC22A10Q63ZE4 541 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 ERICH5Q6P6B1 374 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 ZAR1Q86SH2 424 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 ZZZ3Q8IYH5 903 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 DEFB107AQ8IZN7 70 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 ZADH2Q8N4Q0 377 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 C11orf65Q8NCR3 313 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 FAM13CQ8NE31 585 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 OR10G3Q8NGC4 313 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 C9orf43Q8TAL5 461 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-205ENST00000526954 SPPL2AQ8TCT8 520 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 OIT3Q8WWZ8 545 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 MAL2Q969L2 176 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 NTNG2Q96CW9 530 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 TMCO6Q96DC7 493 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 WBP1Q96G27 269 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 REXO5Q96IC2 774 aaKnown RBP15.18■□□□□ 0.02
CAPN1-205ENST00000526954 SIGLEC12Q96PQ1 595 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 HOXD1Q9GZZ0 328 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 SLC38A1Q9H2H9 487 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 BCL2L10Q9HD36 194 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 PCDHGA10Q9Y5H3 936 aa15.18■□□□□ 0.02
CAPN1-205ENST00000526954 ANKRD33BA6NCL7 494 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 NPIPB9F8W1W9 429 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 SLC28A2O43868 658 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 HS6ST1O60243 411 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 FCMRO60667 390 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 H6PDO95479 791 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 F10P00742 488 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 BCHEP06276 602 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 SFTPCP11686 197 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 TBXA2RP21731 343 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 RFX3P48380 749 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 RASSF2P50749 326 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 LIPEQ05469 1076 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 SCARB2Q14108 478 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 VMACQ2NL98 169 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 DESI1Q6ICB0 168 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 SPINK14Q6IE38 97 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 TYW3Q6IPR3 259 aaKnown RBP15.17■□□□□ 0.02
CAPN1-205ENST00000526954 REEP3Q6NUK4 255 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 FRRS1Q6ZNA5 592 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 CCDC121Q6ZUS5 278 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 ASB18Q6ZVZ8 466 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 GALNT10Q86SR1 603 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 SLC30A8Q8IWU4 369 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 ARHGAP24Q8N264 748 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 EXD3Q8N9H8 876 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 TMEM19Q96HH6 336 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 NODALQ96S42 347 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 CDRT15Q96T59 188 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 TREX2Q9BQ50 279 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-205ENST00000526954 BTBD10Q9BSF8 475 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 RUBCNLQ9H714 662 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 MTHFD2LQ9H903 347 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-205ENST00000526954 TIMMDC1Q9NPL8 285 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 UBQLN4Q9NRR5 601 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 ADA2Q9NZK5 511 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 CNIH4Q9P003 139 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 CD300AQ9UGN4 299 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 CNOT11Q9UKZ1 510 aaKnown RBP15.17■□□□□ 0.02
CAPN1-205ENST00000526954 TP53TG5Q9Y2B4 290 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 WDR45Q9Y484 360 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 PCDHGB6Q9Y5F9 930 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 DSPPQ9NZW4 1301 aa15.17■□□□□ 0.02
CAPN1-205ENST00000526954 ATMQ13315 3056 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 A0A0G2JPF8 293 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 HNRNPCL2B2RXH8 293 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 HNRNPCL3B7ZW38 293 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 KIAA0513O60268 411 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 FADS1O60427 444 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 DPM1O60762 260 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 ICOSLGO75144 302 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 SLC25A12O75746 678 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 UTS2O95399 124 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 HNRNPCL4P0DMR1 293 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 CCL3P10147 92 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 HSD17B1P14061 328 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 PCGF2P35227 344 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 CD97P48960 835 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 GSK3BP49841 420 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 ATP12AP54707 1039 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 HPCAP84074 193 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 CHRNEQ04844 493 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 SNTA1Q13424 505 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 VEZF1Q14119 521 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 GRAMD1BQ3KR37 738 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 DNAL1Q4LDG9 190 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 FLYWCH1Q4VC44 716 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 LACTB2Q53H82 288 aaPredicted RBP15.16■□□□□ 0.02
CAPN1-205ENST00000526954 SAMD4BQ5PRF9 694 aaKnown RBP15.16■□□□□ 0.02
CAPN1-205ENST00000526954 BNC2Q6ZN30 1099 aaPredicted RBP15.16■□□□□ 0.02
CAPN1-205ENST00000526954 Q6ZS92 163 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 MDGA2Q7Z553 956 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 ZNF619Q8N2I2 560 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 FBXW8Q8N3Y1 598 aa15.16■□□□□ 0.02
CAPN1-205ENST00000526954 RBMXL3Q8N7X1 1067 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms