RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 SNTB1Q13884 538 aaKnown RBP9.99□□□□□ -0.81
NEDD8-204ENST00000526430 PGS1Q32NB8 556 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 HMBOX1Q6NT76 420 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 SPATA21Q7Z572 469 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 RETREG3Q86VR2 466 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 LIX1LQ8IVB5 337 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 P3H2Q8IVL5 708 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 SAMD14Q8IZD0 417 aaPredicted RBP9.99□□□□□ -0.81
NEDD8-204ENST00000526430 FAM9CQ8IZT9 166 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 CLEC4FQ8N1N0 589 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 MIER2Q8N344 545 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 VWA5B2Q8N398 1253 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 GLB1L3Q8NCI6 653 aaPredicted RBP9.99□□□□□ -0.81
NEDD8-204ENST00000526430 OR7G1Q8NGA0 311 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 OR10Q1Q8NGQ4 319 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 OR8K3Q8NH51 312 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 OR5P2Q8WZ92 322 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 DAZLQ92904 295 aaKnown RBP9.99□□□□□ -0.81
NEDD8-204ENST00000526430 VPS33AQ96AX1 596 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 Q96MF0 132 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 RILPQ96NA2 401 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 CCDC115Q96NT0 180 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 BBS4Q96RK4 519 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 PIP5K1AQ99755 562 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 CNPPD1Q9BV87 410 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 NMUR2Q9GZQ4 415 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 CDCP1Q9H5V8 836 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 GPATCH2Q9NW75 528 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 TMEM45AQ9NWC5 275 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 SLAMF8Q9P0V8 285 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 B4GALT7Q9UBV7 327 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 Q9UFV3 132 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 RAI1Q7Z5J4 1906 aaPredicted RBP9.99□□□□□ -0.81
NEDD8-204ENST00000526430 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.99□□□□□ -0.812e-8■■■■□ 21.7
NEDD8-204ENST00000526430 CR1P17927 2039 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 FAM234BA2RU67 622 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 FIGNL2A6NMB9 653 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 FBP2O00757 339 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 SMAD7O15105 426 aaKnown RBP9.98□□□□□ -0.81
NEDD8-204ENST00000526430 HS6ST1O60243 411 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 CT45A8P0DMV1 189 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 CT45A9P0DMV2 189 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 GLI4P10075 376 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 NCF2P19878 526 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-204ENST00000526430 S100A3P33764 101 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 HPCAL1P37235 193 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 RPL3P39023 403 aaKnown RBP9.98□□□□□ -0.81
NEDD8-204ENST00000526430 MC3RP41968 323 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 MAN2A2P49641 1150 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 POLR2JP52435 117 aaKnown RBP9.98□□□□□ -0.81
NEDD8-204ENST00000526430 MVDP53602 400 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 CLNS1AP54105 237 aaKnown RBP9.98□□□□□ -0.81
NEDD8-204ENST00000526430 MANFP55145 182 aaKnown RBP9.98□□□□□ -0.81
NEDD8-204ENST00000526430 PSG6Q00889 435 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 HSPB3Q12988 150 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 KLF10Q13118 480 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 RCAN2Q14206 197 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 SQLEQ14534 574 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 EBPQ15125 230 aaKnown RBP9.98□□□□□ -0.81
NEDD8-204ENST00000526430 FBXL19-AS1Q494R0 122 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 VPS26BQ4G0F5 336 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 CT45A2Q5DJT8 189 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 PAGE3Q5JUK9 113 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 FBXW10Q5XX13 1052 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 TMEM107Q6UX40 140 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 B3GNT6Q6ZMB0 384 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 ANKRD46Q86W74 232 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 RPS19BP1Q86WX3 136 aaKnown RBP9.98□□□□□ -0.81
NEDD8-204ENST00000526430 TREML1Q86YW5 311 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 MSRB3Q8IXL7 192 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 NATD1Q8N6N6 113 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 ZFP62Q8NB50 900 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-204ENST00000526430 OR52R1Q8NGF1 315 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 GTF2H4Q92759 462 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 TMEM125Q96AQ2 219 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 NTNG2Q96CW9 530 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 ERP27Q96DN0 273 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 FAM120BQ96EK7 910 aaKnown RBP9.98□□□□□ -0.81
NEDD8-204ENST00000526430 ZBED6CLQ96FA7 236 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-204ENST00000526430 C16orf58Q96GQ5 468 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 VSTM2LQ96N03 204 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 CCDC106Q9BWC9 280 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 FAM107BQ9H098 131 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 SERHL2Q9H4I8 314 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 CCDC167Q9P0B6 97 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 BTNL2Q9UIR0 455 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 MAPRE3Q9UPY8 281 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 KLF13Q9Y2Y9 288 aaPredicted RBP9.98□□□□□ -0.81
NEDD8-204ENST00000526430 FAM215AQ9Y5M1 114 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 FREM3P0C091 2139 aa9.98□□□□□ -0.81
NEDD8-204ENST00000526430 DOCK7Q96N67 2140 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 TRBV5-3A0A0A0MS03 114 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 OR14I1A6ND48 311 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 FAM47E-STBD1D6RA91 191 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 KLRC4-KLRK1H3BQV0 150 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 ZFAND5O76080 213 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 FAM107AO95990 144 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 IL6P05231 212 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 EPXP11678 715 aa9.97□□□□□ -0.81
NEDD8-204ENST00000526430 CYB561P49447 251 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms