RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 TMA16Q96EY4 203 aaKnown RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 KIRREL1Q96J84 757 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 C12orf42Q96LP6 360 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 IL4I1Q96RQ9 567 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 S1PR3Q99500 378 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 NDNQ99608 321 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 NAPGQ99747 312 aaPredicted RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 THAP7Q9BT49 309 aaPredicted RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 SYT11Q9BT88 431 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ERVK-6Q9BXR3 956 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ANKRD30AQ9BXX3 1397 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 PCDH11YQ9BZA8 1340 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 SLC40A1Q9NP59 571 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 SPAG4Q9NPE6 437 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 SLC52A3Q9NQ40 469 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 MRPL40Q9NQ50 206 aaKnown RBP4.08□□□□□ -1.76
CD44-213ENST00000525209 OR2S2Q9NQN1 319 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 C8orf4Q9NR00 106 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 ECHDC1Q9NTX5 307 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 GNG12Q9UBI6 72 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 POLDIP2Q9Y2S7 368 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 MEMO1Q9Y316 297 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 TMED3Q9Y3Q3 217 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 LOXL2Q9Y4K0 774 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 USP16Q9Y5T5 823 aa4.08□□□□□ -1.76
CD44-213ENST00000525209 DEPDC5O75140 1603 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 PZPP20742 1482 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 ARHGAP35Q9NRY4 1499 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 CCDC7Q96M83 1385 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 RAD50Q92878 1312 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 ADGRA2Q96PE1 1338 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 KCNE1BA0A087WTH5 132 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 KBTBD11-OT1A0A1B0GTJ5 212 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 BCLAF3A2AJT9 711 aaKnown RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 CLEC18AA5D8T8 446 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 SMCO2A6NFE2 343 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 FABP12A6NFH5 140 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 CCT8L1PA6NM43 557 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 KCNU1A8MYU2 1149 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 DIRC3C9JPN6 131 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 POC1B-GALNT4F8VUJ3 575 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 MKRN2OSH3BPM6 223 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 KLRC4-KLRK1H3BQV0 150 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 DVL1O14640 695 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 LIN7AO14910 233 aaPredicted RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 TOX3O15405 576 aaPredicted RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 SPINT2O43291 252 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 GMDSO60547 372 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 TSPAN2O60636 221 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 GPX5O75715 221 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 SCELO95171 688 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 VAPBO95292 243 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 RPN2P04844 631 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 LCKP06239 509 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 GSTA2P09210 222 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 GOLGA8HP0CJ92 632 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 HSMCR30P0CW71 290 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 CBSLP0DN79 551 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 ZNF26P17031 533 aaPredicted RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 CFL1P23528 166 aaKnown RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 CD82P27701 267 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 DUTP33316 252 aaKnown RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 CBSP35520 551 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 CFHR2P36980 270 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 AVPR1AP37288 418 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 FEN1P39748 380 aaKnown RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 ACADSBP45954 432 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 GYG1P46976 350 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 MRPL19P49406 292 aaKnown RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 CTSCP53634 463 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 HMGCS2P54868 508 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 UCNP55089 124 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 CD81P60033 236 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 ACTBP60709 375 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 ACTA2P62736 377 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 ACTG1P63261 375 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 ACTG2P63267 376 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 ACTC1P68032 377 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 ACTA1P68133 377 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 LCN2P80188 198 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 MADCAM1Q13477 382 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 HNF4GQ14541 408 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 PDCD4Q53EL6 469 aaKnown RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 C5orf47Q569G3 176 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 THOC7Q6I9Y2 204 aaKnown RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 CDC42EP5Q6NZY7 148 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 SLC23A3Q6PIS1 610 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 CLEC18BQ6UXF7 455 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 DCDC5Q6ZRR9 648 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 POLNQ7Z5Q5 900 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 TFAP2DQ7Z6R9 452 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 PRUNE1Q86TP1 453 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 PALB2Q86YC2 1186 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 RBFAQ8N0V3 343 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 ARHGAP18Q8N392 663 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 FGFRL1Q8N441 504 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 MARVELD2Q8N4S9 558 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 SLC5A8Q8N695 610 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 CLDN19Q8N6F1 224 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 CCDC185Q8N715 623 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms