RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 TMEM170AQ8WVE7 144 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 UCN3Q969E3 161 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 INTS12Q96CB8 462 aaKnown RBP6.13□□□□□ -1.43
NEDD8-203ENST00000524927 H2AFJQ9BTM1 129 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 TRAF4Q9BUZ4 470 aaPredicted RBP6.13□□□□□ -1.43
NEDD8-203ENST00000524927 TDRD1Q9BXT4 1180 aaKnown RBP6.13□□□□□ -1.43
NEDD8-203ENST00000524927 RAB6CQ9H0N0 254 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 UGT1A7Q9HAW7 530 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 MAGEF1Q9HAY2 307 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 ACKR4Q9NPB9 350 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 SPAG4Q9NPE6 437 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 PNRC2Q9NPJ4 139 aaKnown RBP6.13□□□□□ -1.43
NEDD8-203ENST00000524927 ELOVL5Q9NYP7 299 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 PDP1Q9P0J1 537 aaPredicted RBP6.13□□□□□ -1.43
NEDD8-203ENST00000524927 MKLN1Q9UL63 735 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 FAM169AQ9Y6X4 670 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 UBR4Q5T4S7 5183 aa6.13□□□□□ -1.43
NEDD8-203ENST00000524927 TRBV5-3A0A0A0MS03 114 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 CCT8L1PA6NM43 557 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 DFFAO00273 331 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 TIMM23O14925 209 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 CTSVO60911 334 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 PRB2P02812 416 aaPredicted RBP6.12□□□□□ -1.43
NEDD8-203ENST00000524927 EPB41P11171 864 aaKnown RBP6.12□□□□□ -1.43
NEDD8-203ENST00000524927 CNR1P21554 472 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 GPR12P47775 334 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 UBA52P62987 128 aaKnown RBP6.12□□□□□ -1.43
NEDD8-203ENST00000524927 OLR1P78380 273 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 SLC18A2Q05940 514 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 PTK6Q13882 451 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 FAM189A2Q15884 450 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 HIST2H2ACQ16777 129 aaPredicted RBP6.12□□□□□ -1.43
NEDD8-203ENST00000524927 CDO1Q16878 200 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 ATP13A5Q4VNC0 1218 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 KLHL22Q53GT1 634 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 DPY19L2P1Q6NXN4 242 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 PLXDC2Q6UX71 529 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 GSTA5Q7RTV2 222 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 TBC1D26Q86UD7 250 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 ANKRD13BQ86YJ7 626 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 CFAP206Q8IYR0 622 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 CADM3Q8N126 398 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 RASGEF1CQ8N431 466 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 KIF2BQ8N4N8 673 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 CCDC89Q8N998 374 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 IQUBQ8NA54 791 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 C9orf106Q8NAJ2 232 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 LPCAT1Q8NF37 534 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 LILRB1Q8NHL6 650 aaPredicted RBP6.12□□□□□ -1.43
NEDD8-203ENST00000524927 DTX3LQ8TDB6 740 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 GTF3AQ92664 365 aaKnown RBP6.12□□□□□ -1.43
NEDD8-203ENST00000524927 ANKRD9Q96BM1 317 aaPredicted RBP6.12□□□□□ -1.43
NEDD8-203ENST00000524927 MMABQ96EY8 250 aaPredicted RBP6.12□□□□□ -1.43
NEDD8-203ENST00000524927 LINC00615Q96LM1 132 aaPredicted RBP6.12□□□□□ -1.43
NEDD8-203ENST00000524927 FAM111AQ96PZ2 611 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 BBS4Q96RK4 519 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 SLC39A3Q9BRY0 314 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 HGH1Q9BTY7 390 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 SUCNR1Q9BXA5 334 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 GHITMQ9H3K2 345 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 ACP6Q9NPH0 428 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 CORO1CQ9ULV4 474 aaPredicted RBP6.12□□□□□ -1.43
NEDD8-203ENST00000524927 ERVK-11Q9UQG0 969 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 CHKBQ9Y259 395 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 B3GALT5Q9Y2C3 310 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 KLHL20Q9Y2M5 609 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 FAM96BQ9Y3D0 163 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 LYVE1Q9Y5Y7 322 aa6.12□□□□□ -1.43
NEDD8-203ENST00000524927 GOLGA6L4A6NEF3 574 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 GOLGA6L9A6NEM1 432 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 RCBTB2O95199 551 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 PPP1R3DO95685 299 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 CD8AP01732 235 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 PCNAP12004 261 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 ALOX12P18054 663 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 EDN2P20800 178 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 CASP1P29466 404 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 PEBP1P30086 187 aaKnown RBP6.11□□□□□ -1.43
NEDD8-203ENST00000524927 SDC4P31431 198 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 TNFSF8P32971 234 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 PPARGP37231 505 aaPredicted RBP6.11□□□□□ -1.43
NEDD8-203ENST00000524927 MMP13P45452 471 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 SLC6A12P48065 614 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 TPI1P60174 286 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 IRX1P78414 480 aaPredicted RBP6.11□□□□□ -1.43
NEDD8-203ENST00000524927 CRYZQ08257 329 aaKnown RBP6.11□□□□□ -1.43
NEDD8-203ENST00000524927 FRG1Q14331 258 aaKnown RBP6.11□□□□□ -1.43
NEDD8-203ENST00000524927 C15orf59Q2T9L4 293 aaPredicted RBP6.11□□□□□ -1.43
NEDD8-203ENST00000524927 PRTGQ2VWP7 1150 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 PGGHGQ32M88 737 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 DPCR1Q3MIW9 517 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 ZDHHC22Q8N966 263 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 SYT14Q8NB59 555 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 DDHD1Q8NEL9 900 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 PRSS3P2Q8NHM4 247 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 LMO3Q8TAP4 145 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 WIPF2Q8TF74 440 aaPredicted RBP6.11□□□□□ -1.43
NEDD8-203ENST00000524927 DHX58Q96C10 678 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 RNF183Q96D59 192 aa6.11□□□□□ -1.43
NEDD8-203ENST00000524927 CABS1Q96KC9 395 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms