RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 BHLHE41Q9C0J9 482 aaPredicted RBP17.4■□□□□ 0.38
FBXO28-205ENST00000523990 ZCCHC3Q9NUD5 404 aaKnown RBP17.4■□□□□ 0.38
FBXO28-205ENST00000523990 FAM120CQ9NX05 1096 aaKnown RBP17.4■□□□□ 0.38
FBXO28-205ENST00000523990 FAM90A27PA6NNH2 459 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 KDM4EB2RXH2 506 aaPredicted RBP17.39■□□□□ 0.38
FBXO28-205ENST00000523990 ACTL6AO96019 429 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 RFX3P48380 749 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 DIO3P55073 304 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 CLDN8P56748 225 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 ZCCHC12Q6PEW1 402 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 SEM1Q6ZVN7 128 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 IFNEQ86WN2 208 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 FADS6Q8N9I5 356 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 SLC16A11Q8NCK7 471 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 OR10Q1Q8NGQ4 319 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 OR14L1PQ8NHC6 308 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 MGARPQ8TDB4 240 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 OR5P2Q8WZ92 322 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 WDYHV1Q96HA8 205 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 PRPF18Q99633 342 aaKnown RBP17.39■□□□□ 0.38
FBXO28-205ENST00000523990 NUF2Q9BZD4 464 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 RTN4RQ9BZR6 473 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 UCK2Q9BZX2 261 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 NEUROD4Q9HD90 331 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 PNPOQ9NVS9 261 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 PPP4R1LQ9P1A2 415 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 CAMK2AQ9UQM7 478 aa17.39■□□□□ 0.38
FBXO28-205ENST00000523990 NKX2-6A6NCS4 301 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 AHRRA9YTQ3 701 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 FAM47E-STBD1D6RA91 191 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 SNRPB2P08579 225 aaKnown RBP17.38■□□□□ 0.37
FBXO28-205ENST00000523990 COX6B1P14854 86 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 ZFP36L2P47974 494 aaKnown RBP17.38■□□□□ 0.37
FBXO28-205ENST00000523990 GFRA1P56159 465 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 CASP8Q14790 479 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 DUSP5Q16690 384 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 RIPPLY2Q5TAB7 128 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 DTNBP1Q96EV8 351 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 C16orf58Q96GQ5 468 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 DUSP26Q9BV47 211 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 CXorf36Q9H7Y0 433 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 MEAF6Q9HAF1 191 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 TAS2R10Q9NYW0 307 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 DKKL1Q9UK85 242 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 MRPS18CQ9Y3D5 142 aaKnown RBP17.38■□□□□ 0.37
FBXO28-205ENST00000523990 SNX8Q9Y5X2 465 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 PDZD2O15018 2839 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 AKAP9Q99996 3911 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 SNNO75324 88 aaPredicted RBP17.38■□□□□ 0.37
FBXO28-205ENST00000523990 TOXO94900 526 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 UTS2O95399 124 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 C6orf47O95873 294 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 EPPINO95925 133 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 HMGN2P05204 90 aaKnown RBP17.38■□□□□ 0.37
FBXO28-205ENST00000523990 PRIM2P49643 509 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 STX5Q13190 355 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 LASP1Q14847 261 aaKnown RBP17.38■□□□□ 0.37
FBXO28-205ENST00000523990 GRAMD1BQ3KR37 738 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 GALNT10Q86SR1 603 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 LACC1Q8IV20 430 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 MCEMP1Q8IX19 187 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 LRRC34Q8IZ02 419 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 OR4K17Q8NGC6 315 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 OTUB1Q96FW1 271 aaPredicted RBP17.38■□□□□ 0.37
FBXO28-205ENST00000523990 YIPF4Q9BSR8 244 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 ENKD1Q9H0I2 346 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 RUBCNLQ9H714 662 aa17.38■□□□□ 0.37
FBXO28-205ENST00000523990 NPDC1Q9NQX5 325 aaPredicted RBP17.38■□□□□ 0.37
FBXO28-205ENST00000523990 MED12LQ86YW9 2145 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 KCNK2O95069 426 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 ALOX5P09917 674 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 IGFBP2P18065 325 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 DPP4P27487 766 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 GCKP35557 465 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 DSCR4P56555 118 aaPredicted RBP17.37■□□□□ 0.37
FBXO28-205ENST00000523990 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.37■□□□□ 0.37
FBXO28-205ENST00000523990 LSM12Q3MHD2 195 aaKnown RBP17.37■□□□□ 0.37
FBXO28-205ENST00000523990 APOOLQ6UXV4 268 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 LIX1LQ8IVB5 337 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 TRIM42Q8IWZ5 723 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 COX18Q8N8Q8 333 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 NAXEQ8NCW5 288 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 OR2M3Q8NG83 312 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 RAB3IL1Q8TBN0 382 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 FAM110BQ8TC76 370 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 SFXN5Q8TD22 340 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 JADE3Q92613 823 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 STACQ99469 402 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 SPOCK3Q9BQ16 436 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 TREX2Q9BQ50 279 aaPredicted RBP17.37■□□□□ 0.37
FBXO28-205ENST00000523990 TRIM8Q9BZR9 551 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 KCNJ16Q9NPI9 418 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 SDHAF3Q9NRP4 125 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 DUSP22Q9NRW4 184 aa17.37■□□□□ 0.37
FBXO28-205ENST00000523990 ZIC3O60481 467 aa17.36■□□□□ 0.37
FBXO28-205ENST00000523990 CPN1P15169 458 aa17.36■□□□□ 0.37
FBXO28-205ENST00000523990 MSX1P28360 303 aa17.36■□□□□ 0.37
FBXO28-205ENST00000523990 CCT3P49368 545 aaKnown RBP17.36■□□□□ 0.37
FBXO28-205ENST00000523990 LHX2P50458 406 aa17.36■□□□□ 0.37
FBXO28-205ENST00000523990 WNT3P56703 355 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms