RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CSTF1Q05048 431 aaKnown RBP3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 CYLC2Q14093 348 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 LTB4RQ15722 352 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 SLC1A5Q15758 541 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 ZIC1Q15915 447 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 USH1GQ495M9 461 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 MS4A13Q5J8X5 152 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 REP15Q6BDI9 236 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 PVRIGQ6DKI7 326 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 ARMCX5Q6P1M9 558 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 DOK6Q6PKX4 331 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 REG3GQ6UW15 175 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 Q7L0L9 218 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 HSD11B1LQ7Z5J1 315 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 SLC47A2Q86VL8 602 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 CENPSQ8N2Z9 138 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 DNAJA3Q96EY1 480 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 PIWIL1Q96J94 861 aaKnown RBP3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 VGLL1Q99990 258 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 GORASP2Q9H8Y8 452 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 PALMDQ9NP74 551 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 AATFQ9NY61 560 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 MUTYHQ9UIF7 546 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 KLK13Q9UKR3 277 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 CHMP2BQ9UQN3 213 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 SLC9A8Q9Y2E8 581 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 NCAPD3P42695 1498 aa3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 ZCCHC6Q5VYS8 1495 aaKnown RBP3.66□□□□□ -1.82
HMGB1P1-201ENST00000522557 SRRM5B3KS81 715 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 H0YCG3 227 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 MAGEB3O15480 346 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 OR1F1O43749 312 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 POP4O95707 220 aaKnown RBP3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 ANXA3P12429 323 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 PRG2P13727 222 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 PSMA5P28066 241 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 EIF2B1Q14232 305 aaKnown RBP3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 RAB35Q15286 201 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 CHI3L2Q15782 390 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 CAMK4Q16566 473 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 SNAI3Q3KNW1 292 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 CCDC152Q4G0S7 254 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 BEND6Q5SZJ8 279 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 ATAD3BQ5T9A4 648 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 CASC1Q6TDU7 716 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 GPRIN3Q6ZVF9 776 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 CEACAM19Q7Z692 300 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 TSEN54Q7Z6J9 526 aaKnown RBP3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 ZNF440Q8IYI8 595 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 RLN3Q8WXF3 142 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 EMG1Q92979 244 aaKnown RBP3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 IWS1Q96ST2 819 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 ZBP1Q9H171 429 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 RHOJQ9H4E5 214 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 ABCC13Q9NSE7 274 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 FAM120CQ9NX05 1096 aaKnown RBP3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 UTP6Q9NYH9 597 aaKnown RBP3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 MGAT4AQ9UM21 535 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 RNF24Q9Y225 148 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 MRPS7Q9Y2R9 242 aaKnown RBP3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 AUP1Q9Y679 476 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 SMAD5-AS1Q9Y6J3 95 aa3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 DDX49Q9Y6V7 483 aaKnown RBP3.65□□□□□ -1.83
HMGB1P1-201ENST00000522557 GPR89AB7ZAQ6 455 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 K7EQM0 130 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 CDX4O14627 284 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 BCAS1O75363 584 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 TM7SF2O76062 418 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 CSF2P04141 144 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 GPR89BP0CG08 455 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 PDHBP11177 359 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 CALML3P27482 149 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 CAPGP40121 348 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 NOP14P78316 857 aaKnown RBP3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 BNIP1Q12981 228 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 ATXN7L3Q14CW9 347 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 UBE2V2Q15819 145 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 TIGITQ495A1 244 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 TTC23Q5W5X9 447 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 CENPPQ6IPU0 288 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 KDELC1Q6UW63 502 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 APOOLQ6UXV4 268 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 CYS1Q717R9 158 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 CATSPER3Q86XQ3 398 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 ZCCHC7Q8N3Z6 543 aaKnown RBP3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 SLC41A3Q96GZ6 507 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 AKR1E2Q96JD6 320 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 C1orf147Q96MC9 270 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 C9orf85Q96MD7 179 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 AGAP3Q96P47 875 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 ZNF607Q96SK3 696 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 ADNPQ9H2P0 1102 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 DHX33Q9H6R0 707 aaKnown RBP3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 POLD4Q9HCU8 107 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 RAI14Q9P0K7 980 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 RCOR3Q9P2K3 495 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 ASB3Q9Y575 518 aa3.64□□□□□ -1.83
HMGB1P1-201ENST00000522557 PTCH1Q13635 1447 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 PDS5BQ9NTI5 1447 aa3.63□□□□□ -1.83
HMGB1P1-201ENST00000522557 A0A1W2PNV4 684 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms