RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 GOLPH3Q9H4A6 298 aa3.59□□□□□ -1.84
SKP1-209ENST00000522552 LRRC19Q9H756 370 aa3.59□□□□□ -1.84
SKP1-209ENST00000522552 NT5MQ9NPB1 228 aa3.59□□□□□ -1.84
SKP1-209ENST00000522552 CHST11Q9NPF2 352 aa3.59□□□□□ -1.84
SKP1-209ENST00000522552 TMEM45AQ9NWC5 275 aa3.59□□□□□ -1.84
SKP1-209ENST00000522552 MS4A12Q9NXJ0 267 aa3.59□□□□□ -1.84
SKP1-209ENST00000522552 ADA2Q9NZK5 511 aa3.59□□□□□ -1.84
SKP1-209ENST00000522552 ZNF229Q9UJW7 825 aa3.59□□□□□ -1.84
SKP1-209ENST00000522552 FLVCR2Q9UPI3 526 aa3.59□□□□□ -1.84
SKP1-209ENST00000522552 POFUT2Q9Y2G5 429 aa3.59□□□□□ -1.84
SKP1-209ENST00000522552 TCAF1Q9Y4C2 921 aa3.59□□□□□ -1.84
SKP1-209ENST00000522552 KPTNQ9Y664 436 aa3.59□□□□□ -1.84
SKP1-209ENST00000522552 R4GN57 208 aa3.59□□□□□ -1.84
SKP1-209ENST00000522552 TRBV5-5A0A0J9YX44 114 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 A0A1W2PPV9 198 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 ZNF99A8MXY4 864 aaPredicted RBP3.58□□□□□ -1.84
SKP1-209ENST00000522552 E7ENQ6 273 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 SIVA1O15304 175 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 EFNA2O43921 213 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 SCN2BO60939 215 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 PIGRP01833 764 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 FGF2P09038 288 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 ALOX5P09917 674 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 ZNF853P0CG23 659 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 UBCP0CG48 685 aaKnown RBP3.58□□□□□ -1.84
SKP1-209ENST00000522552 POLR2CP19387 275 aaPredicted RBP3.58□□□□□ -1.84
SKP1-209ENST00000522552 EIF2S2P20042 333 aaKnown RBP3.58□□□□□ -1.84
SKP1-209ENST00000522552 TCN1P20061 433 aaPredicted RBP3.58□□□□□ -1.84
SKP1-209ENST00000522552 PGCP20142 388 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 LMO1P25800 156 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 IL12BP29460 328 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 HMOX2P30519 316 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 KCNJ3P48549 501 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 RAG2P55895 527 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 PLOD1Q02809 727 aaPredicted RBP3.58□□□□□ -1.84
SKP1-209ENST00000522552 MFAP5Q13361 173 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 ART3Q13508 389 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 PIGHQ14442 188 aaPredicted RBP3.58□□□□□ -1.84
SKP1-209ENST00000522552 RBM39Q14498 530 aaKnown RBP3.58□□□□□ -1.84
SKP1-209ENST00000522552 SF3B4Q15427 424 aaKnown RBP eCLIP3.58□□□□□ -1.847e-7■■■■□ 21.6
SKP1-209ENST00000522552 BCL2A1Q16548 175 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 ACCSLQ4AC99 568 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 SLC35D3Q5M8T2 416 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 PDSS1Q5T2R2 415 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 BHLHB9Q6PI77 547 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 TPGS1Q6ZTW0 290 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 MRPL21Q7Z2W9 205 aaKnown RBP3.58□□□□□ -1.84
SKP1-209ENST00000522552 ANKRD37Q7Z713 158 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 CYP4Z1Q86W10 505 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 MMAAQ8IVH4 418 aaKnown RBP3.58□□□□□ -1.84
SKP1-209ENST00000522552 MFSD6LQ8IWD5 586 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 DCUN1D3Q8IWE4 304 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 GPALPP1Q8IXQ4 340 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 LINC00518Q8N0U6 118 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 CENPSQ8N2Z9 138 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 TEX26Q8N6G2 289 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 FAM98AQ8NCA5 519 aaKnown RBP3.58□□□□□ -1.84
SKP1-209ENST00000522552 FBXL13Q8NEE6 735 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 OR4D6Q8NGJ1 314 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 Q8TCH9 128 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 TMEM255BQ8WV15 326 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 NUDCD2Q8WVJ2 157 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 TIMD4Q96H15 378 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 TSSK3Q96PN8 268 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 NEDD4LQ96PU5 975 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 P2RY13Q9BPV8 354 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 DCTN5Q9BTE1 182 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 SLC25A51Q9H1U9 297 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 OPN3Q9H1Y3 402 aaPredicted RBP3.58□□□□□ -1.84
SKP1-209ENST00000522552 UGT1A10Q9HAW8 530 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 ADAP2Q9NPF8 381 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 OLFML3Q9NRN5 406 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 INPP5EQ9NRR6 644 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 TXLNGQ9NUQ3 528 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 IL36GQ9NZH8 169 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 GHRLQ9UBU3 117 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 ZDHHC2Q9UIJ5 367 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 ANAPC7Q9UJX3 599 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 FZD1Q9UP38 647 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 PCDHGB1Q9Y5G3 927 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 MAD1L1Q9Y6D9 718 aa3.58□□□□□ -1.84
SKP1-209ENST00000522552 ARID2Q68CP9 1835 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 A0A1W2PNV4 684 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 FAM74A7A6NL05 159 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 SHISA7A6NL88 538 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 PATE3B3GLJ2 98 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 NPIPA7E9PJI5 369 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 GOLGA8RI6L899 631 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 CFLARO15519 480 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 PRKAB2O43741 272 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 WDR1O75083 606 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 LRCH4O75427 683 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 KRT33AO76009 404 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 ATP1B1P05026 303 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 TFAP2AP05549 437 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 CT62P0C5K7 136 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 NPIPA8P0DM63 369 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 DARSP14868 501 aaKnown RBP3.57□□□□□ -1.84
SKP1-209ENST00000522552 MYOD1P15172 320 aa3.57□□□□□ -1.84
SKP1-209ENST00000522552 ZNF24P17028 368 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms