RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TUBAL3A6NHL2 446 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 PIP5K1BO14986 540 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 GMFGO60234 142 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 NPHS1O60500 1241 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 TGM6O95932 706 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 IGKV1D-16P01601 117 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 ART1P52961 327 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 MANFP55145 182 aaKnown RBP18.73■□□□□ 0.59
SDCBP-209ENST00000522243 RNF165Q6ZSG1 346 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 NUP43Q8NFH3 380 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 ZFP28Q8NHY6 868 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 FBXO30Q8TB52 745 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 FAM222BQ8WU58 562 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 CLEC4MQ9H2X3 399 aaPredicted RBP18.73■□□□□ 0.59
SDCBP-209ENST00000522243 C3orf14Q9HBI5 128 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 RASSF1Q9NS23 344 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 FAM120CQ9NX05 1096 aaKnown RBP18.73■□□□□ 0.59
SDCBP-209ENST00000522243 JKAMPQ9P055 326 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 ABCG2Q9UNQ0 655 aa18.73■□□□□ 0.59
SDCBP-209ENST00000522243 A6NNC1 897 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 UTS2O95399 124 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 FGF4P08620 206 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 CREB1P16220 341 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 CLK3P49761 638 aaKnown RBP18.72■□□□□ 0.59
SDCBP-209ENST00000522243 IST1P53990 364 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 PSMD4P55036 377 aaKnown RBP18.72■□□□□ 0.59
SDCBP-209ENST00000522243 GRAMD1BQ3KR37 738 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 UGT3A2Q3SY77 523 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 P4HA3Q7Z4N8 544 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 KIF18BQ86Y91 864 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 SLC9A6Q92581 669 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 ZBED6CLQ96FA7 236 aaPredicted RBP18.72■□□□□ 0.59
SDCBP-209ENST00000522243 ZFP3Q96NJ6 502 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 UCN2Q96RP3 112 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 SFXN3Q9BWM7 321 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 RBM24Q9BX46 236 aaKnown RBP18.72■□□□□ 0.59
SDCBP-209ENST00000522243 LGALS13Q9UHV8 139 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 MPDZO75970 2070 aa18.72■□□□□ 0.59
SDCBP-209ENST00000522243 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 FAM221AA4D161 298 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 H0YC42 278 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 TBX19O60806 448 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 KCNH1O95259 989 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 IFI6P09912 130 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 ACP2P11117 423 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 BCKDHAP12694 445 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 PEPDP12955 493 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 TPD52P55327 224 aaPredicted RBP18.71■□□□□ 0.59
SDCBP-209ENST00000522243 PDE7AQ13946 482 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 APOOLQ6UXV4 268 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 SPNS3Q6ZMD2 512 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 CHMP1BQ7LBR1 199 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 CEP70Q8NHQ1 597 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 GIMAP5Q96F15 307 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 OTUB1Q96FW1 271 aaPredicted RBP18.71■□□□□ 0.59
SDCBP-209ENST00000522243 ZNF764Q96H86 408 aaPredicted RBP18.71■□□□□ 0.59
SDCBP-209ENST00000522243 YIPF4Q9BSR8 244 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 TBL1XR1Q9BZK7 514 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 PTGES2Q9H7Z7 377 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 EML4Q9HC35 981 aaKnown RBP18.71■□□□□ 0.59
SDCBP-209ENST00000522243 TMED5Q9Y3A6 229 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 ZNF337Q9Y3M9 751 aa18.71■□□□□ 0.59
SDCBP-209ENST00000522243 TTC36A6NLP5 189 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 H3BML4 177 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 SEC14L5O43304 696 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 HCRTR2O43614 444 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 ANKRD17O75179 2603 aaKnown RBP18.7■□□□□ 0.58
SDCBP-209ENST00000522243 PEX11AO75192 247 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 NKX2-2O95096 273 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 ANGPTL1O95841 491 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 ARRB2P32121 409 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 FRKP42685 505 aaPredicted RBP18.7■□□□□ 0.58
SDCBP-209ENST00000522243 CPA2P48052 419 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 SUCLG1P53597 346 aaKnown RBP18.7■□□□□ 0.58
SDCBP-209ENST00000522243 CLDN15P56746 228 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 BCL2A1Q16548 175 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 FIGNL1Q6PIW4 674 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 CDC20BQ86Y33 519 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 CDRT4Q8N9R6 151 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 GOT1L1Q8NHS2 421 aaPredicted RBP18.7■□□□□ 0.58
SDCBP-209ENST00000522243 AENQ8WTP8 325 aaKnown RBP18.7■□□□□ 0.58
SDCBP-209ENST00000522243 SMPDL3BQ92485 455 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 C1GALT1C1Q96EU7 318 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 C16orf58Q96GQ5 468 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 ROPN1BQ9BZX4 212 aaPredicted RBP18.7■□□□□ 0.58
SDCBP-209ENST00000522243 ROPN1Q9HAT0 212 aaPredicted RBP18.7■□□□□ 0.58
SDCBP-209ENST00000522243 CCM2LQ9NUG4 571 aaPredicted RBP18.7■□□□□ 0.58
SDCBP-209ENST00000522243 GALNT8Q9NY28 637 aa18.7■□□□□ 0.58
SDCBP-209ENST00000522243 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.7■□□□□ 0.58
SDCBP-209ENST00000522243 V9GYY5 206 aaPredicted RBP18.7■□□□□ 0.58
SDCBP-209ENST00000522243 OR2M5A3KFT3 312 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 SHISA8B8ZZ34 492 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 EMC8O43402 210 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 SLU7O95391 586 aaKnown RBP18.69■□□□□ 0.58
SDCBP-209ENST00000522243 EPXP11678 715 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 MAP3K8P41279 467 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 ASMTP46597 345 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 FBXW10Q5XX13 1052 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 MEIOBQ8N635 442 aa18.69■□□□□ 0.58
SDCBP-209ENST00000522243 GATSQ8NAP1 163 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms