RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 CLDN18P56856 261 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 PPP2R2AP63151 447 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 GANABQ14697 944 aaKnown RBP14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 SGCBQ16585 318 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 FBXL19-AS1Q494R0 122 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 KANK2Q63ZY3 851 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 POMZP3Q6PJE2 187 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 ZCCHC23Q6ZST2 131 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 EXOC3L1Q86VI1 746 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 CEP70Q8NHQ1 597 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 PPP1R14CQ8TAE6 165 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 NTNG2Q96CW9 530 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 LMF2Q9BU23 707 aaKnown RBP14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 TRMOQ9BU70 441 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 PINK1Q9BXM7 581 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 PRRG4Q9BZD6 226 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 FAM120CQ9NX05 1096 aaKnown RBP14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 TAS2R7Q9NYW3 318 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 SLC17A7Q9P2U7 560 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 CLCF1Q9UBD9 225 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 ST6GALNAC2Q9UJ37 374 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 PACSIN3Q9UKS6 424 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 VDAC3Q9Y277 283 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 SNX8Q9Y5X2 465 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 KIAA1549Q9HCM3 1950 aa14.61□□□□□ -0.07
IGHV3-42-201ENST00000520410 CSMD1Q96PZ7 3565 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 FREM3P0C091 2139 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 TMEM114B3SHH9 223 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 PIP5K1BO14986 540 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 ANGPTL1O95841 491 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 EPXP11678 715 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 MAPK1P28482 360 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 GAS1P54826 345 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 EEFSECP57772 596 aaKnown RBP14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 RPS3AP61247 264 aaKnown RBP14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 SLC18A2Q05940 514 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 GRAMD1BQ3KR37 738 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 SPDYE7PQ495Y7 208 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 RFTN2Q52LD8 501 aaPredicted RBP14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 ZNF385BQ569K4 471 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 OR2A2Q6IF42 318 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 FIGNL1Q6PIW4 674 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 RIBC1Q8N443 379 aaPredicted RBP14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 COX18Q8N8Q8 333 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 METTL2AQ96IZ6 378 aaKnown RBP14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 MS4A4EQ96PG1 132 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 PIGQQ9BRB3 760 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 C1orf50Q9BV19 199 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 PIGMQ9H3S5 423 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 GIMAP2Q9UG22 337 aa14.6□□□□□ -0.07
IGHV3-42-201ENST00000520410 PDZD2O15018 2839 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 TTC36A6NLP5 189 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 SHISA8B8ZZ34 492 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 NDUFB5O43674 189 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 FADS1O60427 444 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 ZIC3O60481 467 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 DIAPH2O60879 1101 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 PEX11AO75192 247 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 TGM6O95932 706 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 ALOX5P09917 674 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 PRPH2P23942 346 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 ASMTP46597 345 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 VSNL1P62760 191 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 SORDQ00796 357 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 C17orf67Q0P5P2 114 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 KEAP1Q14145 624 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 KIAA0040Q15053 153 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 TESK1Q15569 626 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 ARL13AQ5H913 290 aaPredicted RBP14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 SPNS3Q6ZMD2 512 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 Q6ZSR9 355 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 R3HCC1LQ7Z5L2 792 aaKnown RBP14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 FADS6Q8N9I5 356 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 CDRT4Q8N9R6 151 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 CHDHQ8NE62 594 aaPredicted RBP14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 SH3YL1Q96HL8 342 aaPredicted RBP14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 TUBB1Q9H4B7 451 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 ANKZF1Q9H8Y5 726 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 ZCCHC3Q9NUD5 404 aaKnown RBP14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 NDRG3Q9UGV2 375 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 TMED5Q9Y3A6 229 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 MRPS18CQ9Y3D5 142 aaKnown RBP14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 ZNF337Q9Y3M9 751 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 TRAF6Q9Y4K3 522 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 CCL27Q9Y4X3 112 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 DNAJC15Q9Y5T4 150 aa14.59□□□□□ -0.07
IGHV3-42-201ENST00000520410 A0A1W2PNV4 684 aa14.58□□□□□ -0.08
IGHV3-42-201ENST00000520410 OR2M5A3KFT3 312 aa14.58□□□□□ -0.08
IGHV3-42-201ENST00000520410 SH3D21A4FU49 640 aa14.58□□□□□ -0.08
IGHV3-42-201ENST00000520410 H0YC42 278 aa14.58□□□□□ -0.08
IGHV3-42-201ENST00000520410 EIF1AYO14602 144 aaKnown RBP14.58□□□□□ -0.08
IGHV3-42-201ENST00000520410 LSM1O15116 133 aaKnown RBP14.58□□□□□ -0.08
IGHV3-42-201ENST00000520410 EMC8O43402 210 aa14.58□□□□□ -0.08
IGHV3-42-201ENST00000520410 NPHS1O60500 1241 aa14.58□□□□□ -0.08
IGHV3-42-201ENST00000520410 SLU7O95391 586 aaKnown RBP14.58□□□□□ -0.08
IGHV3-42-201ENST00000520410 PLGP00747 810 aaPredicted RBP14.58□□□□□ -0.08
IGHV3-42-201ENST00000520410 SOAT1P35610 550 aa14.58□□□□□ -0.08
IGHV3-42-201ENST00000520410 PRIM2P49643 509 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms