RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 RUBCNLQ9H714 662 aa12.91□□□□□ -0.34
VEGFA-221ENST00000520265 NEUROD4Q9HD90 331 aa12.91□□□□□ -0.34
VEGFA-221ENST00000520265 PCNX1Q96RV3 2341 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 NKX2-6A6NCS4 301 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 HNRNPRO43390 633 aaKnown RBP12.9□□□□□ -0.34
VEGFA-221ENST00000520265 CPSF4O95639 269 aaKnown RBP12.9□□□□□ -0.34
VEGFA-221ENST00000520265 HMGN2P05204 90 aaKnown RBP12.9□□□□□ -0.34
VEGFA-221ENST00000520265 FREM3P0C091 2139 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 GLI4P10075 376 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 BMP7P18075 431 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 ATP6V1C1P21283 382 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 DPP4P27487 766 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 FRKP42685 505 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-221ENST00000520265 WNT3P56703 355 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 CLDN8P56748 225 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 POU6F2P78424 691 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-221ENST00000520265 CRYZQ08257 329 aaKnown RBP12.9□□□□□ -0.34
VEGFA-221ENST00000520265 RCAN2Q14206 197 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 ZNF630Q2M218 657 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-221ENST00000520265 CCNJQ5T5M9 372 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 AAGABQ6PD74 315 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 ENPP6Q6UWR7 440 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 HDXQ7Z353 690 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 MARCH3Q86UD3 253 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 ANKRD46Q86W74 232 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 CLECL1Q8IZS7 167 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 ZNF614Q8N883 585 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 ADAMTS15Q8TE58 950 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 ZBTB18Q99592 522 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 TIMP4Q99727 224 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 UGT2B28Q9BY64 529 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 UCK2Q9BZX2 261 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 WDR55Q9H6Y2 383 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-221ENST00000520265 CXorf36Q9H7Y0 433 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 MEAF6Q9HAF1 191 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 KCNJ16Q9NPI9 418 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 SIRT3Q9NTG7 399 aaPredicted RBP12.9□□□□□ -0.34
VEGFA-221ENST00000520265 FAM120CQ9NX05 1096 aaKnown RBP12.9□□□□□ -0.34
VEGFA-221ENST00000520265 GIN1Q9NXP7 522 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 MED11Q9P086 117 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 ABCG2Q9UNQ0 655 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 FAM215AQ9Y5M1 114 aa12.9□□□□□ -0.34
VEGFA-221ENST00000520265 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 RNF103-CHMP3A0A140T963 221 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 C9JVG2 144 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 FAM47E-STBD1D6RA91 191 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 SCDO00767 359 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 HDAC3O15379 428 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 NKX2-2O95096 273 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 IGKV1D-16P01601 117 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 KRT16P08779 473 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 IFI6P09912 130 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 HK1P19367 917 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 EPHA3P29320 983 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 SRD5A2P31213 254 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 KIR3DL1P43629 444 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 RNF144AP50876 292 aaPredicted RBP12.89□□□□□ -0.35
VEGFA-221ENST00000520265 RPS26P62854 115 aaKnown RBP12.89□□□□□ -0.35
VEGFA-221ENST00000520265 MLC1Q15049 377 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 SF3B4Q15427 424 aaKnown RBP eCLIP12.89□□□□□ -0.352e-10■■■□□ 17
VEGFA-221ENST00000520265 SMU1Q2TAY7 513 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 GRAMD1BQ3KR37 738 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 DCST1Q5T197 706 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 BHLHB9Q6PI77 547 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 UBQLNLQ8IYU4 475 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 CLEC4FQ8N1N0 589 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 VPS37AQ8NEZ2 397 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 RAB3IL1Q8TBN0 382 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 LRRC8CQ8TDW0 803 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 DUSP19Q8WTR2 217 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 SMPDL3BQ92485 455 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 COQ8BQ96D53 544 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 GIMAP5Q96F15 307 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 SLC35G5Q96KT7 338 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 MARK4Q96L34 752 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 ATP6V1G3Q96LB4 118 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 G6PC3Q9BUM1 346 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 OR2B2Q9GZK3 357 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 PTGES2Q9H7Z7 377 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 ASIC5Q9NY37 505 aa12.89□□□□□ -0.35
VEGFA-221ENST00000520265 A0A0G2JNJ9 132 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 AHRRA9YTQ3 701 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 SLCO1B7G3V0H7 640 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 C19orf84I3L1E1 186 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 SDHDO14521 159 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 NDUFB5O43674 189 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 DIAPH2O60879 1101 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 KCNK2O95069 426 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 ANGPTL1O95841 491 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 ACTL6AO96019 429 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 HOXD4P09016 255 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-221ENST00000520265 S100A3P33764 101 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 PTGER4P35408 488 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 ZFP36L2P47974 494 aaKnown RBP12.88□□□□□ -0.35
VEGFA-221ENST00000520265 STARP49675 285 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 CLNS1AP54105 237 aaKnown RBP12.88□□□□□ -0.35
VEGFA-221ENST00000520265 SLC18A1P54219 525 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 CASP9P55211 416 aa12.88□□□□□ -0.35
VEGFA-221ENST00000520265 DSCR4P56555 118 aaPredicted RBP12.88□□□□□ -0.35
VEGFA-221ENST00000520265 HBA1P69905 142 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms