RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TPSAB1Q15661 275 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SMAD1Q15797 465 aaKnown RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF79Q15937 498 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 NDUFAF6Q330K2 333 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ARHGAP15Q53QZ3 475 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SPIN4Q56A73 249 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF805Q5CZA5 627 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ARL13AQ5H913 290 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SPANXN3Q5MJ09 141 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 DCAF10Q5QP82 559 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 PRAMEF19Q5SWL8 479 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 CES4AQ5XG92 561 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 STEAP4Q687X5 459 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF57Q68EA5 555 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 H3F3CQ6NXT2 135 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 WDR73Q6P4I2 378 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ULK3Q6PHR2 472 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 LRRN1Q6UXK5 716 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 CD300LDQ6UXZ3 194 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 DEF8Q6ZN54 512 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 KANSL1Q7Z3B3 1105 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SPATA19Q7Z5L4 167 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 KIAA0907Q7Z7F0 614 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 LRRC28Q86X40 367 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 CEP97Q8IW35 865 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SERPINA12Q8IW75 414 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 APCDD1Q8J025 514 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 FAM185AQ8N0U4 392 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 Q8N1Y9 231 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SYNE4Q8N205 404 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 FAM26EQ8N5C1 309 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 LINC00482Q8N8I6 264 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR2T35Q8NGX2 323 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR6K3Q8NGY3 331 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR56B4Q8NH76 319 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 TRMT10AQ8TBZ6 339 aaKnown RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 RXFP4Q8TDU9 374 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ING5Q8WYH8 240 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 LPAR1Q92633 364 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 THRSPQ92748 146 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 LINGO1Q96FE5 620 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SMARCD1Q96GM5 515 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 CELF6Q96J87 481 aaKnown RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SGCZQ96LD1 299 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 C12orf66Q96MD2 445 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 CCDC115Q96NT0 180 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 TAAR9Q96RI9 348 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SIGLEC11Q96RL6 698 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 GFM1Q96RP9 751 aaKnown RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ACOX2Q99424 681 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 RBBP8Q99708 897 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 MAP3K3Q99759 626 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 MRPL57Q9BQC6 102 aaKnown RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SYT3Q9BQG1 590 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 IFT27Q9BW83 186 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 GATA5Q9BWX5 397 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 CDCA4Q9BXL8 241 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ADGRE3Q9BY15 652 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 NLNQ9BYT8 704 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 MAGEB5Q9BZ81 275 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 TM6SF2Q9BZW4 377 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ARHGAP39Q9C0H5 1083 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SPRTNQ9H040 489 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMEM117Q9H0C3 514 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 WDR55Q9H6Y2 383 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ISYNA1Q9NPH2 558 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 MIEF1Q9NQG6 463 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 EIF2B3Q9NR50 452 aaKnown RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 DLL4Q9NR61 685 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 HEBP1Q9NRV9 189 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 DMAC2Q9NW81 257 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMEM248Q9NWD8 314 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 CCDC167Q9P0B6 97 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 KCMF1Q9P0J7 381 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 NTMQ9P121 344 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 PSORS1C1Q9UIG5 152 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 LEF1Q9UJU2 399 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 FBXL4Q9UKA2 621 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 EMCNQ9ULC0 261 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZDHHC8Q9ULC8 765 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 UBQLN1Q9UMX0 589 aaKnown RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 MOKQ9UQ07 419 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 AAR2Q9Y312 384 aaKnown RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMED3Q9Y3Q3 217 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 PCDHA9Q9Y5H5 950 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 PUS1Q9Y606 427 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLCO1B1Q9Y6L6 691 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 PIK3C2BO00750 1634 aa4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF638Q14966 1978 aaKnown RBP4.52□□□□□ -1.69
HMGB1P19-201ENST00000517578 SPATA31A3Q5VYP0 1347 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 FER1L4A9Z1Z3 1794 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 A0A0U1RQF3 1178 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 A0A1W2PQL4 384 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 GSAPA4D1B5 854 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 TBC1D3FA6NER0 549 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 NAP1L6A6NFF2 107 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 URADA6NGE7 173 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 LRRC14BA6NHZ5 514 aa4.51□□□□□ -1.69
HMGB1P19-201ENST00000517578 ANXA2P2A6NMY6 339 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms