RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 NPIPA8P0DM63 369 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 NAGAP17050 411 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 HOXB8P17481 243 aaPredicted RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 GNLYP22749 145 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 GLRA1P23415 457 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 LMO1P25800 156 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 RPL13AP40429 203 aaKnown RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 NOVA1P51513 510 aaKnown RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 EFNB2P52799 333 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 ATP5J2P56134 94 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 PSMC5P62195 406 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 ERVK-25P63136 954 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 BASP1P80723 227 aaKnown RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 NHLH1Q02575 133 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 MFGE8Q08431 387 aaPredicted RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 CYLC2Q14093 348 aaPredicted RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 PON2Q15165 354 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 MAPRE2Q15555 327 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 C3AR1Q16581 482 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 MOGAT2Q3SYC2 334 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 GLYR1Q49A26 553 aaPredicted RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 VPS26BQ4G0F5 336 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 EOGTQ5NDL2 527 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 STEAP1BQ6NZ63 245 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 TPGS1Q6ZTW0 290 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 LIMS2Q7Z4I7 341 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 C17orf64Q86WR6 236 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 LRRC6Q86X45 466 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 ERI1Q8IV48 349 aaKnown RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 GPALPP1Q8IXQ4 340 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 CMTM8Q8IZV2 173 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 CLIP4Q8N3C7 705 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 MARVELD2Q8N4S9 558 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 DNAJC22Q8N4W6 341 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR7A2PQ8NGA2 310 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 CNIH3Q8TBE1 160 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 CD99L2Q8TCZ2 262 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 MAGEC3Q8TD91 643 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 PIH1D2Q8WWB5 315 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 ART4Q93070 314 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF514Q96K75 400 aaPredicted RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 RPP25Q9BUL9 199 aaKnown RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 SHCBP1LQ9BZQ2 653 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 SEMA4CQ9C0C4 833 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 ILKAPQ9H0C8 392 aaPredicted RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 LRRC19Q9H756 370 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 GPN2Q9H9Y4 310 aaPredicted RBP3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 PELI2Q9HAT8 420 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 UGT1A10Q9HAW8 530 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLC25A19Q9HC21 320 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 CSNK1G1Q9HCP0 422 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 S100A14Q9HCY8 104 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 NT5MQ9NPB1 228 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZFP57Q9NU63 452 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZDHHC2Q9UIJ5 367 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 IKZF3Q9UKT9 509 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 NPIPA1Q9UND3 350 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 PRELID1Q9Y255 219 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 POFUT2Q9Y2G5 429 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 PPIL1Q9Y3C6 166 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 PCDHAC2Q9Y5I4 1007 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 RAI2Q9Y5P3 530 aa3.53□□□□□ -1.84
RNU4-60P-201ENST00000517239 ADCY9O60503 1353 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 A0A0J9YVX5 310 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 TRBV5-5A0A0J9YX44 114 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 SHISA7A6NL88 538 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 CCT8L1PA6NM43 557 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 ARHGEF33A8MVX0 844 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 C2CD4DB7Z1M9 353 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 PROB1E7EW31 1015 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 CCSO14618 274 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 TOR1AO14656 332 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 SIVA1O15304 175 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 P2RX6O15547 441 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 KIAA0513O60268 411 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 WDR1O75083 606 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 ZNF623O75123 536 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 LRCH4O75427 683 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 ATP5HO75947 161 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 ANXA9O76027 345 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 MYO1DO94832 1006 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 DIRAS1O95057 198 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 FGF2P09038 288 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 MYL2P10916 166 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 MYOD1P15172 320 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 GM2AP17900 193 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 KITLGP21583 273 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 TBXA2RP21731 343 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 MAT2AP31153 395 aaKnown RBP3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 CDH11P55287 796 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 BTG1P62324 171 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 NTHL1P78549 312 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 ZP4Q12836 540 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 MFAP5Q13361 173 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 PMS2P3Q13401 168 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 ART3Q13508 389 aa3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 PIGHQ14442 188 aaPredicted RBP3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 ZNF268Q14587 947 aaPredicted RBP3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 ATXN7L3Q14CW9 347 aaPredicted RBP3.52□□□□□ -1.85
RNU4-60P-201ENST00000517239 C18orf21Q32NC0 220 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms