RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 RTL4Q6ZR62 310 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 CYP4Z2PQ8N1L4 340 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 GOLM1Q8NBJ4 401 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 HIPK4Q8NE63 616 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 TNIP2Q8NFZ5 429 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 NFKBIDQ8NI38 313 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 OIT3Q8WWZ8 545 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 TM9SF4Q92544 642 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 SECISBP2Q96T21 854 aaKnown RBP19.3■□□□□ 0.68
LSM6-207ENST00000515311 KCTD14Q9BQ13 255 aaPredicted RBP19.3■□□□□ 0.68
LSM6-207ENST00000515311 TREX2Q9BQ50 279 aaPredicted RBP19.3■□□□□ 0.68
LSM6-207ENST00000515311 SLC38A1Q9H2H9 487 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 PIF1Q9H611 641 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 ZBTB20Q9HC78 741 aaPredicted RBP19.3■□□□□ 0.68
LSM6-207ENST00000515311 FBXO34Q9NWN3 711 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 CD300AQ9UGN4 299 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 TUBD1Q9UJT1 453 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 WDR45Q9Y484 360 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 PCDHGA10Q9Y5H3 936 aa19.3■□□□□ 0.68
LSM6-207ENST00000515311 DSPPQ9NZW4 1301 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 A0A0G2JPF8 293 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 ELOVL7A1L3X0 281 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 OR5H15A6NDH6 313 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 HNRNPCL2B2RXH8 293 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 HNRNPCL3B7ZW38 293 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 KIAA0513O60268 411 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 FCMRO60667 390 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 DNAJC8O75937 253 aaPredicted RBP19.29■□□□□ 0.68
LSM6-207ENST00000515311 NGFRP08138 427 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 HNRNPCL4P0DMR1 293 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 CYP4B1P13584 511 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 RPP38P78345 283 aaKnown RBP19.29■□□□□ 0.68
LSM6-207ENST00000515311 RHDQ02161 417 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 OC90Q02509 493 aaPredicted RBP19.29■□□□□ 0.68
LSM6-207ENST00000515311 ZSCAN26Q16670 478 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 FLYWCH1Q4VC44 716 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 TYW3Q6IPR3 259 aaKnown RBP19.29■□□□□ 0.68
LSM6-207ENST00000515311 FRRS1Q6ZNA5 592 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 ZAR1Q86SH2 424 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 GALNT10Q86SR1 603 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 IFNEQ86WN2 208 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 HPS6Q86YV9 775 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 MICU2Q8IYU8 434 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 ZNF619Q8N2I2 560 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 FAM13CQ8NE31 585 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 OR10G3Q8NGC4 313 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 BBS10Q8TAM1 723 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 HGDQ93099 445 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 TMCO6Q96DC7 493 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 HOXD1Q9GZZ0 328 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 ADNPQ9H2P0 1102 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 RUBCNLQ9H714 662 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 MTHFD2LQ9H903 347 aaPredicted RBP19.29■□□□□ 0.68
LSM6-207ENST00000515311 SH2D2AQ9NP31 389 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 ANGPT4Q9Y264 503 aa19.29■□□□□ 0.68
LSM6-207ENST00000515311 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.29■□□□□ 0.68
LSM6-207ENST00000515311 NPIPB9F8W1W9 429 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 PGM3O95394 542 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 ZIC2O95409 532 aaPredicted RBP19.28■□□□□ 0.68
LSM6-207ENST00000515311 HTR1EP28566 365 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 KCNAB2Q13303 367 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 CEACAM7Q14002 265 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 FXNQ16595 210 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 ST3GAL2Q16842 350 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 LINC00303Q3SY05 128 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 INTS11Q5TA45 600 aaKnown RBP19.28■□□□□ 0.68
LSM6-207ENST00000515311 TMEM81Q6P7N7 255 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 ZNF227Q86WZ6 799 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 RNF138Q8WVD3 245 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 UBQLN4Q9NRR5 601 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 ANKRD10Q9NXR5 420 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 LRFN1Q9P244 771 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 MKLN1Q9UL63 735 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 ABCG2Q9UNQ0 655 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 USP22Q9UPT9 525 aa19.28■□□□□ 0.68
LSM6-207ENST00000515311 CHCHD2Q9Y6H1 151 aaPredicted RBP19.28■□□□□ 0.68
LSM6-207ENST00000515311 TNRC6AQ8NDV7 1962 aaKnown RBP19.27■□□□□ 0.68
LSM6-207ENST00000515311 GSC2O15499 205 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 ICOSLGO75144 302 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 NEURL1O76050 574 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 UTS2O95399 124 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 ETS2P15036 469 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 TBXA2RP21731 343 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 PCBP3P57721 371 aaKnown RBP19.27■□□□□ 0.68
LSM6-207ENST00000515311 ARG2P78540 354 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 CHRNEQ04844 493 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 COL28A1Q2UY09 1125 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 ASRGL1Q7L266 308 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 RNF148Q8N7C7 305 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 ZNF527Q8NB42 609 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 OR5M3Q8NGP4 307 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 SPPL2AQ8TCT8 520 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 PAQR8Q8TEZ7 354 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 ABHD17AQ96GS6 310 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 THTPAQ9BU02 230 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 PLA2G3Q9NZ20 509 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 CNIH4Q9P003 139 aa19.27■□□□□ 0.68
LSM6-207ENST00000515311 GMPR2Q9P2T1 348 aaKnown RBP19.27■□□□□ 0.68
LSM6-207ENST00000515311 SUCOQ9UBS9 1254 aaKnown RBP19.27■□□□□ 0.68
LSM6-207ENST00000515311 DCTP40126 519 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms