RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	MDH1	P40925	334 aa	Known RBP	2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	SMS	P52788	366 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	EFNA3	P52797	238 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	ACTR1A	P61163	376 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	GALK2	Q01415	458 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	PDE7A	Q13946	482 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	DPYS	Q14117	519 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	PRR4	Q16378	134 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	CCDC40	Q4G0X9	1142 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	EPC2	Q52LR7	807 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	TCHHL1	Q5QJ38	904 aa	Predicted RBP	2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	B3GLCT	Q6Y288	498 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	WDR88	Q6ZMY6	472 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	CCDC73	Q6ZRK6	1079 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	ARMCX2	Q7L311	632 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	SLC22A16	Q86VW1	577 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	PYROXD2	Q8N2H3	581 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	COLGALT1	Q8NBJ5	622 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	RFESD	Q8TAC1	157 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	EXOC6	Q8TAG9	804 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	PTPRU	Q92729	1446 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	HIST1H2AC	Q93077	130 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	EEF2KMT	Q96G04	330 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	EBF4	Q9BQW3	602 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	JPH2	Q9BR39	696 aa	Predicted RBP	2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	TCHP	Q9BT92	498 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	THUMPD2	Q9BTF0	503 aa	Known RBP	2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	CARD6	Q9BX69	1037 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	NMUR2	Q9GZQ4	415 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	ISG20L2	Q9H9L3	353 aa	Known RBP	2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	EXOSC3	Q9NQT5	275 aa	Known RBP	2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	NARF	Q9UHQ1	456 aa		2.72	□□□□□ -1.97
MATR3-223	ENST00000514402	TRBV7-9	A0A0J9YWB2	115 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	TRBV2	A0A0J9YWF9	115 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	FAM231B	A6NCW3	169 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	C11orf98	E9PRG8	122 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	EEF2K	O00418	725 aa	Known RBP	2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	CFLAR	O15519	480 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	KLHL41	O60662	606 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	ECD	O95905	644 aa	Predicted RBP	2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	AK1	P00568	194 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	IGHV3-23	P01764	117 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	IGKV3-11	P04433	115 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	ALPI	P09923	528 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	SFTPC	P11686	197 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	AREG	P15514	252 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	IL2RG	P31785	369 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	ASMT	P46597	345 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	HAND2	P61296	217 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	BNIP1	Q12981	228 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	SBK1	Q52WX2	424 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	LGSN	Q5TDP6	509 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	NKAIN2	Q5VXU1	208 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	CWC27	Q6UX04	472 aa	Known RBP	2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	MOB1B	Q7L9L4	216 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	ADAMTSL2	Q86TH1	951 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	BATF2	Q8N1L9	274 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	OTUD6B	Q8N6M0	293 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	RNF138	Q8WVD3	245 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	SLC5A11	Q8WWX8	675 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	P3H4	Q92791	437 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	DTD2	Q96FN9	168 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	GPR137	Q96N19	417 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	ACCS	Q96QU6	501 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	NAP1L3	Q99457	506 aa	Predicted RBP	2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	HES7	Q9BYE0	225 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	CCSER1	Q9C0I3	900 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	TRPV6	Q9H1D0	765 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	EHD1	Q9H4M9	534 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	VPS37B	Q9H9H4	285 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	ANKMY1	Q9P2S6	941 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	FAM153A	Q9UHL3	310 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	DHRS7	Q9Y394	339 aa		2.71	□□□□□ -1.98
MATR3-223	ENST00000514402	CCDC169	A6NNP5	214 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	TLR4	O00206	839 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	HSF2BP	O75031	334 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	GMNN	O75496	209 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	CXCL14	O95715	111 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	TOP1	P11387	765 aa	Known RBP	2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	ZNF32	P17041	273 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	FUT1	P19526	365 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	IDS	P22304	550 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	DNAJB1	P25685	340 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	TRPC1	P48995	793 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	SLC26A2	P50443	739 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	GBX2	P52951	348 aa	Predicted RBP	2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	GNB2	P62879	340 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	RIPK1	Q13546	671 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	ZKSCAN8	Q15776	578 aa	Predicted RBP	2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	GPAT3	Q53EU6	434 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	BOLA3	Q53S33	107 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	MEDAG	Q5VYS4	303 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	WSCD1	Q658N2	575 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	RAET1G	Q6H3X3	334 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	AFTPH	Q6ULP2	937 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	TSEN54	Q7Z6J9	526 aa	Known RBP	2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	AMZ2	Q86W34	360 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	LINC01555	Q8NAE3	123 aa		2.7	□□□□□ -1.98
MATR3-223	ENST00000514402	RNF139	Q8WU17	664 aa		2.7	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms