RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 OR2G6Q5TZ20 316 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 ULK3Q6PHR2 472 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 BTN2A1Q7KYR7 527 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 MFSD6LQ8IWD5 586 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 FATE1Q969F0 183 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 KCTD12Q96CX2 325 aaKnown RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 LRIG1Q96JA1 1093 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 TNFRSF12AQ9NP84 129 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 OR2S2Q9NQN1 319 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 TRIM64A6NGJ6 449 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 TRIM64BA6NI03 449 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 PRSS44E7EML9 344 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 PEX14O75381 377 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 SNAPINO95295 136 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 CTSAP10619 480 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 CD1EP15812 388 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 SLC6A6P31641 620 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 HMGCLP35914 325 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 XKR7Q5GH72 579 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 SAXO2Q658L1 398 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 PIANPQ8IYJ0 282 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 CAMKVQ8NCB2 501 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 OR4E2Q8NGC2 313 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 OR2L2Q8NH16 312 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 SPRYD4Q8WW59 207 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 ELP4Q96EB1 424 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 RADILQ96JH8 1075 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 GPER1Q99527 375 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 GABARAPL1Q9H0R8 117 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 PRMT8Q9NR22 394 aaPredicted RBP10.64□□□□□ -0.71
TCOF1-211ENST00000513346 GMEB2Q9UKD1 530 aa10.64□□□□□ -0.71
TCOF1-211ENST00000513346 TRBV2A0A0J9YWF9 115 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 CSO75390 466 aaKnown RBP10.63□□□□□ -0.71
TCOF1-211ENST00000513346 PPM1BO75688 479 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 GPX5O75715 221 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 HNF1BP35680 557 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 GNALP38405 381 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 KRBOX4Q5JUW0 171 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 FAM209AQ5JX71 171 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 LYPD4Q6UWN0 246 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 AVL9Q8NBF6 648 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 ZBTB44Q8NCP5 570 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 ZDHHC1Q8WTX9 485 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 SLC25A46Q96AG3 418 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 ALOXE3Q9BYJ1 711 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 SDHAF2Q9NX18 166 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 GABRPO00591 440 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 CHP2O43745 196 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 GPR37L1O60883 481 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 RPS25P62851 125 aaKnown RBP10.63□□□□□ -0.71
TCOF1-211ENST00000513346 PIN1Q13526 163 aaPredicted RBP10.63□□□□□ -0.71
TCOF1-211ENST00000513346 GSG1LQ6UXU4 331 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 CCDC190Q86UF4 302 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 ATCAYQ86WG3 371 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 DCUN1D3Q8IWE4 304 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 ANKRD53Q8N9V6 530 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 HUS1BQ8NHY5 278 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 THRSPQ92748 146 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 SLC2A4RGQ9NR83 387 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 DDX60LQ5H9U9 1706 aaKnown RBP10.63□□□□□ -0.71
TCOF1-211ENST00000513346 RNASET2O00584 256 aaKnown RBP10.63□□□□□ -0.71
TCOF1-211ENST00000513346 NDUFS4O43181 175 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 SULT1B1O43704 296 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 KAT7O95251 611 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 KLF8O95600 359 aaPredicted RBP10.63□□□□□ -0.71
TCOF1-211ENST00000513346 CYB5AP00167 134 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 ACP2P11117 423 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 SOX2P48431 317 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 S100A10P60903 97 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 GPLD1P80108 840 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 ELAVL3Q14576 367 aaKnown RBP10.63□□□□□ -0.71
TCOF1-211ENST00000513346 UNC5DQ6UXZ4 953 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 FOXRED2Q8IWF2 684 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 TMEM163Q8TC26 289 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 ALG8Q9BVK2 526 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 SYT4Q9H2B2 425 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 NOX3Q9HBY0 568 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 ZNF304Q9HCX3 659 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 PCDHGA2Q9Y5H1 932 aa10.63□□□□□ -0.71
TCOF1-211ENST00000513346 MROH6A6NGR9 719 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 KCNK5O95279 499 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 C1QAP02745 245 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 C1GALT1C1LP0DN25 315 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 IL12BP29460 328 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 PTH2RP49190 550 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 ELOAQ14241 798 aaKnown RBP10.62□□□□□ -0.71
TCOF1-211ENST00000513346 DHCR24Q15392 516 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 SUSD1Q6UWL2 747 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 OR52E4Q8NGH9 312 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 KLHDC7BQ96G42 594 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 POT1Q9NUX5 634 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 NRAPQ86VF7 1730 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 UNC119BA6NIH7 251 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 TOR1AO14656 332 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 SDC3O75056 442 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 NCR1O76036 304 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 LATS1O95835 1130 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 HRGP04196 525 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 VIPR2P41587 438 aa10.62□□□□□ -0.71
TCOF1-211ENST00000513346 GIPRP48546 466 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms