RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ABI3BPQ7Z7G0 1075 aa14□□□□□ -0.17
USP38-202ENST00000510377 SETD7Q8WTS6 366 aaKnown RBP14□□□□□ -0.17
USP38-202ENST00000510377 TBC1D20Q96BZ9 403 aa14□□□□□ -0.17
USP38-202ENST00000510377 PDXPQ96GD0 296 aa14□□□□□ -0.17
USP38-202ENST00000510377 SLC41A3Q96GZ6 507 aa14□□□□□ -0.17
USP38-202ENST00000510377 RANBP3Q9H6Z4 567 aaPredicted RBP14□□□□□ -0.17
USP38-202ENST00000510377 BAIAP2Q9UQB8 552 aa14□□□□□ -0.17
USP38-202ENST00000510377 CACNG2Q9Y698 323 aa14□□□□□ -0.17
USP38-202ENST00000510377 TRIM64BA6NI03 449 aa14□□□□□ -0.17
USP38-202ENST00000510377 DUXAA6NLW8 204 aa14□□□□□ -0.17
USP38-202ENST00000510377 IFNA16P05015 189 aa14□□□□□ -0.17
USP38-202ENST00000510377 DEFB134Q4QY38 66 aa14□□□□□ -0.17
USP38-202ENST00000510377 TP53I3Q53FA7 332 aa14□□□□□ -0.17
USP38-202ENST00000510377 PRICKLE2Q7Z3G6 844 aa14□□□□□ -0.17
USP38-202ENST00000510377 TCEAL8Q8IYN2 117 aa14□□□□□ -0.17
USP38-202ENST00000510377 FBXO15Q8NCQ5 510 aaPredicted RBP14□□□□□ -0.17
USP38-202ENST00000510377 NEURL3Q96EH8 262 aa14□□□□□ -0.17
USP38-202ENST00000510377 TRMT61AQ96FX7 289 aaKnown RBP14□□□□□ -0.17
USP38-202ENST00000510377 RAD9AQ99638 391 aa14□□□□□ -0.17
USP38-202ENST00000510377 GTPBP2Q9BX10 602 aaKnown RBP14□□□□□ -0.17
USP38-202ENST00000510377 RBCK1Q9BYM8 510 aa14□□□□□ -0.17
USP38-202ENST00000510377 RSPH9Q9H1X1 276 aaPredicted RBP14□□□□□ -0.17
USP38-202ENST00000510377 OR51B4Q9Y5P0 310 aa14□□□□□ -0.17
USP38-202ENST00000510377 FOXE1O00358 373 aaPredicted RBP13.99□□□□□ -0.17
USP38-202ENST00000510377 SLC2A10O95528 541 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 PEPDP12955 493 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 ZNF3P17036 446 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 CTGFP29279 349 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 HOXC8P31273 242 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 STXBP1P61764 594 aaKnown RBP13.99□□□□□ -0.17
USP38-202ENST00000510377 ZXDCQ2QGD7 858 aaPredicted RBP13.99□□□□□ -0.17
USP38-202ENST00000510377 TP53I13Q8NBR0 393 aaPredicted RBP13.99□□□□□ -0.17
USP38-202ENST00000510377 ADAMTS19Q8TE59 1207 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 TM4SF18Q96CE8 201 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 TM7SF3Q9NS93 570 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 OR6C2Q9NZP2 312 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 USP36Q9P275 1121 aaKnown RBP13.99□□□□□ -0.17
USP38-202ENST00000510377 NEUROG3Q9Y4Z2 214 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 IGLON5A6NGN9 336 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 HEPACAM2A8MVW5 462 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 RCBTB2O95199 551 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 SLC35G6P0C7Q6 338 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 ACADLP28330 430 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 TRIM23P36406 574 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 STARP49675 285 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 HYAL4Q2M3T9 481 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 C3orf38Q5JPI3 329 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 FAM26DQ5JW98 314 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 HES5Q5TA89 166 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 GET4Q7L5D6 327 aaPredicted RBP13.99□□□□□ -0.17
USP38-202ENST00000510377 SMAP2Q8WU79 429 aaPredicted RBP13.99□□□□□ -0.17
USP38-202ENST00000510377 TRMT2BQ96GJ1 504 aaKnown RBP13.99□□□□□ -0.17
USP38-202ENST00000510377 GPN1Q9HCN4 374 aaPredicted RBP13.99□□□□□ -0.17
USP38-202ENST00000510377 UBQLN2Q9UHD9 624 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 MED31Q9Y3C7 131 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 AP1M2Q9Y6Q5 423 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 SIP14410 1827 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 UNC119BA6NIH7 251 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 EMC8O43402 210 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 FMO6PO60774 539 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 ETV6P41212 452 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 SLC6A11P48066 632 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 RFX2P48378 723 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 ZNHIT3Q15649 155 aaPredicted RBP13.99□□□□□ -0.17
USP38-202ENST00000510377 NNATQ16517 81 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 LYPD8Q6UX82 237 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 OR4C15Q8NGM1 316 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 TCF7L1Q9HCS4 588 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 MGAT4CQ9UBM8 478 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 MAB21L2Q9Y586 359 aa13.99□□□□□ -0.17
USP38-202ENST00000510377 A0A087WUU8 490 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 CSN2P05814 226 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 RHOP08100 348 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 SNRPBP14678 240 aaKnown RBP13.98□□□□□ -0.17
USP38-202ENST00000510377 RAB3BP20337 219 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 PRPH2P23942 346 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 FBXW4P57775 412 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 GPM6BQ13491 265 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 MINDY4Q4G0A6 757 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 FAM27D1Q5T7N8 215 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 VITQ6UXI7 678 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 OR4M1Q8NGD0 313 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 DNAJA4Q8WW22 397 aaPredicted RBP13.98□□□□□ -0.17
USP38-202ENST00000510377 RERGQ96A58 199 aaPredicted RBP13.98□□□□□ -0.17
USP38-202ENST00000510377 PLA2G12AQ9BZM1 189 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 GLIPR2Q9H4G4 154 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 ANTXRLA6NF34 631 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 POM121CA8CG34 1229 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 FAM171A2A8MVW0 826 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 HMGN4O00479 90 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 ZNF780AO75290 641 aaPredicted RBP13.98□□□□□ -0.17
USP38-202ENST00000510377 DDX6P26196 483 aaKnown RBP eCLIP13.98□□□□□ -0.17
USP38-202ENST00000510377 VIPR2P41587 438 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 GZMKP49863 264 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 CCR6P51684 374 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 PSMA6P60900 246 aaKnown RBP13.98□□□□□ -0.17
USP38-202ENST00000510377 EFR3AQ14156 821 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 BCL2A1Q16548 175 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 SYT9Q86SS6 491 aa13.98□□□□□ -0.17
USP38-202ENST00000510377 OAFQ86UD1 273 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms