RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 WFIKKN2Q8TEU8 576 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 GDPD5Q8WTR4 605 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 DNAJB3Q8WWF6 145 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 C18orf25Q96B23 403 aaPredicted RBP4.21□□□□□ -1.74
NIPBL-206ENST00000509429 DCPSQ96C86 337 aaKnown RBP4.21□□□□□ -1.74
NIPBL-206ENST00000509429 WBP1Q96G27 269 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 SMIM10Q96HG1 83 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 RAX2Q96IS3 184 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 ZNF333Q96JL9 665 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 TSSK3Q96PN8 268 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 PFDN5Q99471 154 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 CPNE1Q99829 537 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 MYOCQ99972 504 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 RTP3Q9BQQ7 232 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 UTP23Q9BRU9 249 aaKnown RBP4.21□□□□□ -1.74
NIPBL-206ENST00000509429 NICN1Q9BSH3 213 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 TMEM43Q9BTV4 400 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.21□□□□□ -1.74
NIPBL-206ENST00000509429 FICDQ9BVA6 458 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 TRMT61BQ9BVS5 477 aaKnown RBP4.21□□□□□ -1.74
NIPBL-206ENST00000509429 ACTRT3Q9BYD9 372 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 CPEB1Q9BZB8 566 aaKnown RBP4.21□□□□□ -1.74
NIPBL-206ENST00000509429 DPH1Q9BZG8 443 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 UCK2Q9BZX2 261 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 TRIM9Q9C026 710 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 PCDHAC1Q9H158 963 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 KLK15Q9H2R5 256 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 EBF3Q9H4W6 596 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 SLA2Q9H6Q3 261 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 WDR54Q9H977 334 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 SGK2Q9HBY8 427 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 LYRM4Q9HD34 91 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 ABCB9Q9NP78 766 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 KCNMB3Q9NPA1 279 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 KRCC1Q9NPI7 259 aaPredicted RBP4.21□□□□□ -1.74
NIPBL-206ENST00000509429 FAM207AQ9NSI2 230 aaPredicted RBP4.21□□□□□ -1.74
NIPBL-206ENST00000509429 DDX19AQ9NUU7 478 aaKnown RBP4.21□□□□□ -1.74
NIPBL-206ENST00000509429 TREM2Q9NZC2 230 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 RHCGQ9UBD6 479 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 MOKQ9UQ07 419 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 MMP24Q9Y5R2 645 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 NPTNQ9Y639 398 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 URGCP-MRPS24S4R325 110 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 MSH6P52701 1360 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 A2ML1A8K2U0 1454 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 UMODL1Q5DID0 1318 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 SPATA31A5Q5VU36 1347 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 SPATA31A7Q8IWB4 1347 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 SALL1Q9NSC2 1324 aa4.21□□□□□ -1.74
NIPBL-206ENST00000509429 DIP2AQ14689 1571 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 CEP170BQ9Y4F5 1589 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 A0A1W2PNV4 684 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 TMEM213A2RRL7 107 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 METTL21EPA6NDL7 271 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 C5orf52A6NGY3 159 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 UNC119BA6NIH7 251 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 SDR42E2A6NKP2 422 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 DUXAA6NLW8 204 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 PP2D1A8MPX8 630 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 A8MUI8 341 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ANKRD66B4E2M5 251 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 RNASEK-C17orf49H0YIS7 233 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 TEX46H3BTG2 121 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 SGK494L7N484 410 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 WNT9AO14904 365 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 FLRT2O43155 660 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 SGCEO43556 437 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 SELENOFO60613 162 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 TRUB2O95900 331 aaKnown RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 CRYGBP07316 175 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 CHRNGP07510 517 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 PIM1P11309 404 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 CYP11B1P15538 503 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 DPEP1P16444 411 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 CTPS1P17812 591 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 GNAZP19086 355 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ACKR3P25106 362 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 CD40P25942 277 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 APEX1P27695 318 aaKnown RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 PSMB5P28074 263 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ELK4P28324 431 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 UGT2B10P36537 528 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 MTNR1AP48039 350 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 GABRA4P48169 554 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 NDUFV1P49821 464 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 RPL14P50914 215 aaKnown RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 NDST1P52848 882 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 FGF8P55075 233 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 MLF1P58340 268 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 SEC61GP60059 68 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 HERV-K104P63124 156 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ERVK-25P63136 954 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 MRPS22P82650 360 aaKnown RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 PITPNAQ00169 270 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 CNTN2Q02246 1040 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 PDIA2Q13087 525 aaKnown RBP4.2□□□□□ -1.74
NIPBL-206ENST00000509429 GRB7Q14451 532 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 ZNF174Q15697 407 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 VAMP3Q15836 100 aa4.2□□□□□ -1.74
NIPBL-206ENST00000509429 EXT1Q16394 746 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms