RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CES5AQ6NT32 575 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 MRNIPQ6NTE8 343 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 CASC4Q6P4E1 433 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF474Q6S9Z5 364 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 AFTPHQ6ULP2 937 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 UQCC3Q6UW78 93 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 KIAA1324Q6UXG2 1013 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 C1orf186Q6ZWK4 172 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC46A3Q7Z3Q1 461 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 KDELC2Q7Z4H8 507 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 RIMKLAQ8IXN7 391 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 CYP4Z2PQ8N1L4 340 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 C12orf45Q8N5I9 185 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 IQCF1Q8N6M8 205 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 FAM83FQ8NEG4 500 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 OR8J3Q8NGG0 315 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 OR52K2Q8NGK3 314 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 OR6M1Q8NGM8 313 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SPPL2BQ8TCT7 592 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 STYXQ8WUJ0 223 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 GLMPQ8WWB7 406 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 TMBIM1Q969X1 311 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC25A36Q96CQ1 311 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 OTUB1Q96FW1 271 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 CERS2Q96G23 380 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 OR2M2Q96R28 347 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 OR5M11Q96RB7 305 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 RAD9AQ99638 391 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 NPAS1Q99742 590 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 C7orf50Q9BRJ6 194 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SEC22CQ9BRL7 303 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF670Q9BS34 389 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 MED18Q9BUE0 208 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 HDHD5Q9BXW7 423 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 FGFBP2Q9BYJ0 223 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 MAGEB5Q9BZ81 275 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 PPIL3Q9H2H8 161 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 TASP1Q9H6P5 420 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 WDR55Q9H6Y2 383 aaPredicted RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 GORASP2Q9H8Y8 452 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 ANKRA2Q9H9E1 313 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SMYD2Q9NRG4 433 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SDHAF2Q9NX18 166 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SPHK1Q9NYA1 384 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 COA4Q9NYJ1 87 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 CD274Q9NZQ7 290 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 CCDC167Q9P0B6 97 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 CTSFQ9UBX1 484 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 TCEAL9Q9UHQ7 104 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SCP2D1Q9UJQ7 156 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 SLC39A10Q9ULF5 831 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 TBC1D24Q9ULP9 559 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 CLEC4AQ9UMR7 237 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 LAMP3Q9UQV4 416 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 MAN2B2Q9Y2E5 1009 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 PLEKHA6Q9Y2H5 1048 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 CMAHPQ9Y471 501 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 PCDHB7Q9Y5E2 793 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 U3KQV3 271 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 USP34Q70CQ2 3546 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 OTOFQ9HC10 1997 aa4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 BAZ2AQ9UIF9 1905 aaKnown RBP4.27□□□□□ -1.73
PDLIM5-211ENST00000508531 A0A0J9YYE9 177 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 A0A1W2PQ09 198 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 RPS10-NUDT3A0A1W2PQS6 291 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 FAM149AA5PLN7 773 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 TRAPPC13A5PLN9 417 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 MFSD2BA6NFX1 497 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 C3orf70A6NLC5 250 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF729A6NN14 1252 aaPredicted RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 WASHC1A8K0Z3 465 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 CLCA1A8K7I4 914 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 SGK494L7N484 410 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 RHODO00212 210 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 CASC3O15234 703 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 DPM1O60762 260 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 NBNO60934 754 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 EEDO75530 441 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 SC5DO75845 299 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 KRT33AO76009 404 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 POP4O95707 220 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 CLIC3O95833 236 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 FADS2O95864 444 aaKnown RBP4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 NDUFB10O96000 172 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 CST1P01037 141 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 IFNA10P01566 189 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 IL1AP01583 271 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 DNTTP04053 509 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 LCKP06239 509 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 FBP1P09467 338 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 CSF3P09919 207 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 TSPAN19P0C672 248 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 ACSM4P0C7M7 580 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 RFPL3SP0C7P2 107 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 ZNF806P0C7X5 589 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 PRG2P13727 222 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 CD1EP15812 388 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 ARSBP15848 533 aa4.26□□□□□ -1.73
PDLIM5-211ENST00000508531 IL7RP16871 459 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms