RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 AIFM2Q9BRQ8 373 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 WACQ9BTA9 647 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 MRI1Q9BV20 369 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMED9Q9BVK6 235 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 ACAT2Q9BWD1 397 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 HDHD5Q9BXW7 423 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 ABCG5Q9H222 651 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 PPIL3Q9H2H8 161 aaKnown RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR51J1Q9H342 316 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 OR51I1Q9H343 314 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 LRRN3Q9H3W5 708 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 OSGEPL1Q9H4B0 414 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 RERGLQ9H628 205 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 EVA1AQ9H8M9 152 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 GALNT9Q9HCQ5 603 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 B3GAT2Q9NPZ5 323 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 TMEM39AQ9NV64 488 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 LYARQ9NX58 379 aaKnown RBP4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 NLGN3Q9NZ94 848 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 CFAP97Q9P2B7 532 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 TRPC4Q9UBN4 977 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 DUX4Q9UBX2 424 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 MALT1Q9UDY8 824 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 SLC23A1Q9UHI7 598 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 CD84Q9UIB8 345 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 KIF25Q9UIL4 384 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 SCP2D1Q9UJQ7 156 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 ZNF222Q9UK12 451 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 MGAT4AQ9UM21 535 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 GABRQQ9UN88 632 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 MAB21L2Q9Y586 359 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 NPFFR2Q9Y5X5 522 aa4.66□□□□□ -1.66
HMGB3P16-201ENST00000508037 PIKFYVEQ9Y2I7 2098 aa4.65□□□□□ -1.66
HMGB3P16-201ENST00000508037 MEIKINA0A087WXM9 373 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 A0A0A6YYJ9 748 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 LOC102723532A0A0G2JNH3 316 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 TEX13CA0A0J9YWL9 993 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 A0A0X1KG70 313 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 FAM86C2PA6NEL3 165 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 C1QTNF9BB2RNN3 333 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 I3L521 148 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 GTPBP1O00178 669 aaKnown RBP4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 SAP18O00422 153 aaKnown RBP4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 PGRMC2O15173 223 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 CTDSPLO15194 276 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 SURF4O15260 269 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 TEX28O15482 410 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 ADAM12O43184 909 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 LRRTM2O43300 516 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 RNF13O43567 381 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 GSTZ1O43708 216 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 SSNA1O43805 119 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 VEGFDO43915 354 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 TSC22D2O75157 780 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 MTX2O75431 263 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 REM1O75628 298 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 TSPAN9O75954 239 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 TPPPO94811 219 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR5F1O95221 314 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 FGF19O95750 216 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 ECDO95905 644 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 EFEMP2O95967 443 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 PAHP00439 452 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 MT-ND5P03915 603 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 GBAP04062 536 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 TCRBP04435 133 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 IFNA16P05015 189 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 ITGB2P05107 769 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 SERPIND1P05546 499 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 IGFBP1P08833 259 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 H2AFB2P0C5Z0 115 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 ELFN1P0C7U0 828 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR12D1P0DN82 309 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 SAGP10523 405 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 ALPPL2P10696 532 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 TYRP14679 529 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 RPL17P18621 184 aaKnown RBP4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 ELK1P19419 428 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 DNASE1P24855 282 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 DDX6P26196 483 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 GRNP28799 593 aaKnown RBP4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 LCN1P31025 176 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 PRKAR1BP31321 381 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 EVI2BP34910 448 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 BSGP35613 385 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 ETV3P41162 512 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC6A11P48066 632 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 TGM4P49221 684 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 MMP15P51511 669 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 CTSCP53634 463 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 SRP54P61011 504 aaKnown RBP4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 RPS7P62081 194 aaKnown RBP4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 SNRPD2P62316 118 aaKnown RBP4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 ACTC1P68032 377 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 ACTA1P68133 377 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 PRR5P85299 388 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 FOXD4Q12950 439 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 HSPB3Q12988 150 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 NFE2L1Q14494 772 aa4.65□□□□□ -1.67
HMGB3P16-201ENST00000508037 P2RY14Q15391 338 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms