RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 LYARQ9NX58 379 aaKnown RBP13.53□□□□□ -0.24
DDX41-208ENST00000507955 PILRAQ9UKJ1 303 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 ZNF232Q9UNY5 417 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 SGK494L7N484 410 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 PEX12O00623 359 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 AP3D1O14617 1153 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 ASNA1O43681 348 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 B3GALT2O43825 422 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 SLC2A10O95528 541 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 SEMA4FO95754 770 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 IGHV4-34P06331 123 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 SMIM10L1P0DMW3 83 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 ACP2P11117 423 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 GNSP15586 552 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 NDUFS1P28331 727 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 TNFSF8P32971 234 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 VSX2P58304 361 aaPredicted RBP13.53□□□□□ -0.24
DDX41-208ENST00000507955 ILF3Q12906 894 aaKnown RBP eCLIP13.53□□□□□ -0.24
DDX41-208ENST00000507955 SUZ12Q15022 739 aaKnown RBP13.53□□□□□ -0.24
DDX41-208ENST00000507955 SPHARQ15513 63 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 FAM214AQ32MH5 1076 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 PUS10Q3MIT2 529 aaKnown RBP13.53□□□□□ -0.24
DDX41-208ENST00000507955 NXNL2Q5VZ03 156 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 TYW3Q6IPR3 259 aaKnown RBP13.53□□□□□ -0.24
DDX41-208ENST00000507955 FIGNL1Q6PIW4 674 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 DGAT2L6Q6ZPD8 337 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 NRMQ8IXM6 262 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 SLC44A3Q8N4M1 653 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 C9orf43Q8TAL5 461 aaPredicted RBP13.53□□□□□ -0.24
DDX41-208ENST00000507955 RSC1A1Q92681 617 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 SMIM10Q96HG1 83 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 ZNF582Q96NG8 517 aaPredicted RBP13.53□□□□□ -0.24
DDX41-208ENST00000507955 TRNT1Q96Q11 434 aaKnown RBP13.53□□□□□ -0.24
DDX41-208ENST00000507955 POLR2J2Q9GZM3 115 aaKnown RBP13.53□□□□□ -0.24
DDX41-208ENST00000507955 NDOR1Q9UHB4 597 aa13.53□□□□□ -0.24
DDX41-208ENST00000507955 MN1Q10571 1320 aaPredicted RBP13.53□□□□□ -0.24
DDX41-208ENST00000507955 AGRPO00253 132 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 DYRK3O43781 588 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 HYAL3O43820 417 aaPredicted RBP13.52□□□□□ -0.24
DDX41-208ENST00000507955 CT62P0C5K7 136 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 CSTF2P33240 577 aaKnown RBP eCLIP13.52□□□□□ -0.24
DDX41-208ENST00000507955 CDK5Q00535 292 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 MXD1Q05195 221 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 KIR2DS3Q14952 304 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 RAB30Q15771 203 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 SPANXN2Q5MJ10 180 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 OR52I1Q8NGK6 324 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 SLC22A18Q96BI1 424 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 NEDD4LQ96PU5 975 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 MCHR1Q99705 422 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 ZFYVE21Q9BQ24 234 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 MUTYHQ9UIF7 546 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 KCNE5Q9UJ90 142 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 WDR45Q9Y484 360 aa13.52□□□□□ -0.24
DDX41-208ENST00000507955 CDC42EP2O14613 210 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 CASC3O15234 703 aaKnown RBP13.52□□□□□ -0.25
DDX41-208ENST00000507955 CDC123O75794 336 aaPredicted RBP13.52□□□□□ -0.25
DDX41-208ENST00000507955 SLITRK5O94991 958 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 CPMP14384 443 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 DRD1P21728 446 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 TSFMP43897 325 aaKnown RBP13.52□□□□□ -0.25
DDX41-208ENST00000507955 MADCAM1Q13477 382 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 ZNF836Q6ZNA1 936 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 PLEKHM3Q6ZWE6 761 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 RRM2BQ7LG56 351 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 TAF8Q7Z7C8 310 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 TRIM69Q86WT6 500 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 ZFP41Q8N8Y5 198 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 NT5CQ8TCD5 201 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 ZFPM2Q8WW38 1151 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 ARHGDIGQ99819 225 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 MARCH7Q9H992 704 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 KLHL3Q9UH77 587 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 SCML1Q9UN30 329 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 CFL2Q9Y281 166 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 SLC22A7Q9Y694 548 aa13.52□□□□□ -0.25
DDX41-208ENST00000507955 TNRC18O15417 2968 aaPredicted RBP13.51□□□□□ -0.25
DDX41-208ENST00000507955 LOC110117498-PIK3R3F6TDL0 507 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 NT5EP21589 574 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 TCEA1P23193 301 aaKnown RBP13.51□□□□□ -0.25
DDX41-208ENST00000507955 SOX6P35712 828 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 ANXA11P50995 505 aaKnown RBP13.51□□□□□ -0.25
DDX41-208ENST00000507955 GNA13Q14344 377 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 GDF7Q7Z4P5 450 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 ZAR1Q86SH2 424 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 GPR151Q8TDV0 419 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 GATAD2BQ8WXI9 593 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 OTULINQ96BN8 352 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 TOE1Q96GM8 510 aaKnown RBP13.51□□□□□ -0.25
DDX41-208ENST00000507955 MSLNLQ96KJ4 702 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 MS4A4EQ96PG1 132 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 SERINC2Q96SA4 455 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 SLC30A2Q9BRI3 323 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 GPR174Q9BXC1 333 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 ASPNQ9BXN1 380 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 SMURF1Q9HCE7 757 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 ITGB1BP2Q9UKP3 347 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 SLC7A7Q9UM01 511 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 ZNF443Q9Y2A4 671 aaPredicted RBP13.51□□□□□ -0.25
DDX41-208ENST00000507955 RPL36Q9Y3U8 105 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms