RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 EMDP50402 254 aa11.33□□□□□ -0.59
LIN54-206ENST00000506560 ZNF267Q14586 743 aaPredicted RBP11.33□□□□□ -0.59
LIN54-206ENST00000506560 SPCS2Q15005 226 aa11.33□□□□□ -0.59
LIN54-206ENST00000506560 MRPL2Q5T653 305 aaKnown RBP11.33□□□□□ -0.59
LIN54-206ENST00000506560 PRAMEF8Q5VWM4 474 aa11.33□□□□□ -0.59
LIN54-206ENST00000506560 PRAMEF7Q5VXH5 474 aa11.33□□□□□ -0.59
LIN54-206ENST00000506560 ACSM5Q6NUN0 579 aa11.33□□□□□ -0.59
LIN54-206ENST00000506560 WDR88Q6ZMY6 472 aa11.33□□□□□ -0.59
LIN54-206ENST00000506560 TTLL10Q6ZVT0 673 aa11.33□□□□□ -0.59
LIN54-206ENST00000506560 GALNT12Q8IXK2 581 aa11.33□□□□□ -0.59
LIN54-206ENST00000506560 ZNF321PQ8N8H1 164 aa11.33□□□□□ -0.59
LIN54-206ENST00000506560 OR51Q1Q8NH59 317 aa11.33□□□□□ -0.59
LIN54-206ENST00000506560 AHCYL2Q96HN2 611 aaKnown RBP11.33□□□□□ -0.59
LIN54-206ENST00000506560 FAM46AQ96IP4 442 aaKnown RBP11.33□□□□□ -0.59
LIN54-206ENST00000506560 ZNF285Q96NJ3 590 aa11.33□□□□□ -0.59
LIN54-206ENST00000506560 NUDT22Q9BRQ3 303 aa11.33□□□□□ -0.59
LIN54-206ENST00000506560 DUSP15Q9H1R2 295 aaPredicted RBP11.33□□□□□ -0.59
LIN54-206ENST00000506560 PDE7BQ9NP56 450 aa11.33□□□□□ -0.59
LIN54-206ENST00000506560 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.33□□□□□ -0.59
LIN54-206ENST00000506560 PLCL2Q9UPR0 1127 aa11.33□□□□□ -0.59
LIN54-206ENST00000506560 A0A087WV62 115 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 TMEM150CB9EJG8 249 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 H3BMH7 237 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 FOLR1P15328 257 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 ACVR2AP27037 513 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 CD1CP29017 333 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 MLLT10P55197 1068 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 EEF1A1P68104 462 aaKnown RBP11.33□□□□□ -0.6
LIN54-206ENST00000506560 STX4Q12846 297 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 PTCHD4Q6ZW05 846 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 ERI1Q8IV48 349 aaKnown RBP11.33□□□□□ -0.6
LIN54-206ENST00000506560 ZNF614Q8N883 585 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 CDRT4Q8N9R6 151 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 OR8D4Q8NGM9 314 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 ZNF675Q8TD23 568 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 RPL3LQ92901 407 aaKnown RBP11.33□□□□□ -0.6
LIN54-206ENST00000506560 RIT1Q92963 219 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 TUBA1CQ9BQE3 449 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 MTHFD2LQ9H903 347 aaPredicted RBP11.33□□□□□ -0.6
LIN54-206ENST00000506560 UCK1Q9HA47 277 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 PRTFDC1Q9NRG1 225 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 SLC13A4Q9UKG4 626 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 ATXN7L1Q9ULK2 861 aaPredicted RBP11.33□□□□□ -0.6
LIN54-206ENST00000506560 MGAT4BQ9UQ53 548 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 BDP1A6H8Y1 2624 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 A8MUA0 341 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 SYT5O00445 386 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 ENTPD6O75354 484 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 NSA2O95478 260 aaKnown RBP11.33□□□□□ -0.6
LIN54-206ENST00000506560 CCNYL3P0C7X3 344 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 PRKAR1BP31321 381 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 MAGEA8P43361 318 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 GPR4P46093 362 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 EMP3P54852 163 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 ILKQ13418 452 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 FAM53BQ14153 422 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 NPSR1Q6W5P4 371 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 PLEKHM3Q6ZWE6 761 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 GDF7Q7Z4P5 450 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 PRSS58Q8IYP2 241 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 B3GNT7Q8NFL0 401 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 CLIP3Q96DZ5 547 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 NECAB3Q96P71 396 aaPredicted RBP11.33□□□□□ -0.6
LIN54-206ENST00000506560 YIPF2Q9BWQ6 316 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 CALML5Q9NZT1 146 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 NDOR1Q9UHB4 597 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 ERVK-19Q9WJR5 959 aa11.33□□□□□ -0.6
LIN54-206ENST00000506560 KCNK2O95069 426 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 CLEC12AQ5QGZ9 265 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 DHRS4L2Q6PKH6 230 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 SLC36A4Q6YBV0 504 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 PRSS48Q7RTY5 328 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 PEX5LQ8IYB4 626 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 ZNF619Q8N2I2 560 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 TCEANCQ8N8B7 351 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 OR1L3Q8NH93 324 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 RORBQ92753 470 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 TSLPQ969D9 159 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 RBM18Q96H35 190 aaKnown RBP11.32□□□□□ -0.6
LIN54-206ENST00000506560 FOLH1BQ9HBA9 442 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 TVP23BQ9NYZ1 205 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 SLC7A7Q9UM01 511 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 PCDHGB1Q9Y5G3 927 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 C19orf67A6NJJ6 358 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 CLCA1A8K7I4 914 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 PRKYO43930 277 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 STX11O75558 287 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 OR2B3O76000 313 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 OXSR1O95747 527 aaPredicted RBP11.32□□□□□ -0.6
LIN54-206ENST00000506560 PTHP01270 115 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 RGS19P49795 217 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 CDC42P60953 191 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 ST3GAL4Q11206 333 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 NFATC3Q12968 1075 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 CTF1Q16619 201 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 NDUFAF6Q330K2 333 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 PDZK1Q5T2W1 519 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 C1orf94Q6P1W5 598 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 ZNF730Q6ZMV8 503 aa11.32□□□□□ -0.6
LIN54-206ENST00000506560 NRMQ8IXM6 262 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms